PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100040700161
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 254aa    MW: 27519.9 Da    PI: 9.1926
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100040700161genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.54.3e-10119147234
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslg 34 
                                   +y+GVr+++ +g+W+AeIrdp+    + +r++lg
  Ote100040700161|100040700161 119 RYRGVRQRP-WGKWAAEIRDPY----KaARVWLG 147
                                   7********.**********86....35****98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541716.54E-8119148IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.2E-13119147IPR001471AP2/ERF domain
CDDcd000188.93E-14119147No hitNo description
PROSITE profilePS5103213.604119147IPR001471AP2/ERF domain
PfamPF008471.8E-4119147IPR001471AP2/ERF domain
SMARTSM003801.7E-4119173IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MLLKVANPNE NGEGFDNALL SGVNREQEMS AMVSALAHVV AGDVSSHHDT ATVACKRGRE  60
QHSSDSATTF CTGFTDFSIG TPDSGGRSII TSAAAIYSYS PTFSSNQPNA DSSSGMKRRY  120
RGVRQRPWGK WAAEIRDPYK AARVWLGXXX XXXXXXXRTL REPTTRPPST SAAAKPSSTS  180
PKMSGSFTLH LHLHRQPPLF SSLLRRYAVL XXXXXPPVSH SPMVFPSALD NQPEASGGGD  240
ELFWTDSGHQ TSCG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090449.19e-38ethylene-responsive transcription factor ABR1-like
TrEMBLA0A4D8YFS02e-35A0A4D8YFS0_SALSN; EREBP-like factor
STRINGMigut.H02460.1.p2e-28(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165