PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100037740011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 357aa MW: 37406.9 Da PI: 6.5866 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.2 | 5.3e-07 | 227 | 253 | 5 | 31 |
HHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 5 hnerErrRRdriNsafeeLrellPkas 31 h+++Er RR+ri +++ L+el+P+a Ote100037740011|100037740011 227 HSIAERLRRERIAERMKALQELVPNAN 253 99***********************73 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 9.10E-5 | 220 | 261 | No hit | No description |
SuperFamily | SSF47459 | 2.49E-7 | 220 | 257 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.455 | 222 | 277 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.0E-6 | 224 | 256 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.2E-4 | 227 | 252 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0048767 | Biological Process | root hair elongation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MQPVSRELNN INTLLNQHQI SPLHEIHSHA QLPQMLASSQ FDPLTPQDDF LDQILSLPAS 60 FPWADDHSPP QLEEQSAAVL ASKLRQHQIS NGAAKVLMLQ QQLMLSRGLA AGNGAGADAA 120 ILPMPEGGHS DVVDGNGFES TNSVQANDAS VKALFNGFAG SLGQTSNQPQ HFHHSQVQNF 180 GGAATGAPSA AATAVNQSAV SGSSGGGAAG QPRQRVRARR GQATDPHSIA ERLRRERIAE 240 RMKALQELVP NANKVLSMSR LGGASAVAPL VADMSSEGKE KEGMSVTEQQ VAKLLEEDMG 300 SAMQYLQGKG LCLMPISLAT AISTSSTCNP LKINANAGPT SPTVSVLTVQ SGNPLKD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020551186.1 | 1e-140 | LOW QUALITY PROTEIN: transcription factor bHLH69-like | ||||
TrEMBL | A0A0H3Y7K9 | 1e-169 | A0A0H3Y7K9_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.J01333.1.p | 1e-118 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3759 | 24 | 45 |