PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100037740011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 357aa    MW: 37406.9 Da    PI: 6.5866
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100037740011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.25.3e-07227253531
                                   HHHHHHHHHHHHHHHHHHHHCTSCCC. CS
                           HLH   5 hnerErrRRdriNsafeeLrellPkas 31 
                                   h+++Er RR+ri +++  L+el+P+a 
  Ote100037740011|100037740011 227 HSIAERLRRERIAERMKALQELVPNAN 253
                                   99***********************73 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.10E-5220261No hitNo description
SuperFamilySSF474592.49E-7220257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.455222277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-6224256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-4227252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048767Biological Processroot hair elongation
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MQPVSRELNN INTLLNQHQI SPLHEIHSHA QLPQMLASSQ FDPLTPQDDF LDQILSLPAS  60
FPWADDHSPP QLEEQSAAVL ASKLRQHQIS NGAAKVLMLQ QQLMLSRGLA AGNGAGADAA  120
ILPMPEGGHS DVVDGNGFES TNSVQANDAS VKALFNGFAG SLGQTSNQPQ HFHHSQVQNF  180
GGAATGAPSA AATAVNQSAV SGSSGGGAAG QPRQRVRARR GQATDPHSIA ERLRRERIAE  240
RMKALQELVP NANKVLSMSR LGGASAVAPL VADMSSEGKE KEGMSVTEQQ VAKLLEEDMG  300
SAMQYLQGKG LCLMPISLAT AISTSSTCNP LKINANAGPT SPTVSVLTVQ SGNPLKD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551186.11e-140LOW QUALITY PROTEIN: transcription factor bHLH69-like
TrEMBLA0A0H3Y7K91e-169A0A0H3Y7K9_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.J01333.1.p1e-118(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37592445