PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100035150051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 187aa MW: 22174.5 Da PI: 6.867 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.7 | 6.7e-15 | 71 | 122 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +++rr+++NRe+ArrsR RK+ ++eL v L +eN++L+++l+++++ Ote100035150051|100035150051 71 RKQRRMISNRESARRSRMRKQRHLDELWSQVLRLRTENHSLIDKLNQISESH 122 79******************************************99998865 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.1E-17 | 67 | 131 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.277 | 69 | 132 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.0E-12 | 69 | 124 | No hit | No description |
SuperFamily | SSF57959 | 9.14E-13 | 71 | 121 | No hit | No description |
Pfam | PF00170 | 1.2E-12 | 71 | 121 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.00E-19 | 72 | 122 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 74 | 89 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 187 aa Download sequence Send to blast |
MIQSDFQEFN YFENLPAFHP SFRLNQTNSP PLQHTRFFPN YYTPLPNGVH EFSPNSSDEA 60 EDHQPRVIDE RKQRRMISNR ESARRSRMRK QRHLDELWSQ VLRLRTENHS LIDKLNQISE 120 SHERFVQENA RLKEEASELR QTLTEINITN SYTIFRDLDD LIPCNTAHLR AESSSNHSVT 180 TSTNLLH |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077776.1 | 3e-84 | basic leucine zipper 43 | ||||
Swissprot | Q9FMC2 | 1e-35 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2G9I825 | 1e-74 | A0A2G9I825_9LAMI; Uncharacterized protein | ||||
STRING | XP_009774323.1 | 6e-65 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 |
Publications ? help Back to Top | |||
---|---|---|---|
|