PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100034100091

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Dof

Protein Properties

Length: 247aa MW: 26586.4 Da PI: 8.9597

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100034100091	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	71.2	1.5e-22	34	70	27	63
zf-Dof 27 sqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +PryfCk+CrryWt+GG+lrnvPvGgg+rknkksss Ote100034100091\|100034100091 34 RKPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKSSS 70 58*******************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	15.501	12	67	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.8E-17	34	67	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	3.0E-7	35	58	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009639	Biological Process	response to red or far red light
GO:0009845	Biological Process	seed germination
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence Send to blast
MDSAQWTQEF GVGKPMAEIG APNACTRPQP QVERKPRYFC KTCRRYWTEG GTLRNVPVGG 60 GSRKNKKSSS SSSSIINPPL HKLPDLNPPS ISPFPSQNPK IHDQGQDLNL GFQAGPQDYS 120 HVPQFLESNA MNSASSANSS TSTTTFSALD FFRNGIAARG LNSFLPTTLE NSTVFGSGFS 180 FQECKPALLF PIEGRNGSSS VAQENVNGSL MFTLGGARRN SSDQGGEHKG QENSNGFWNG 240 MLGGSSW

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022898416.1	4e-64	dof zinc finger protein DOF2.5-like isoform X1
TrEMBL	A0A2G9I463	1e-82	A0A2G9I463_9LAMI; Uncharacterized protein
STRING	Migut.B01894.1.p	2e-62	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419