PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100033630021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 327aa    MW: 36305.6 Da    PI: 4.4562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100033630021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.4e-20111159254
                           AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                                   +y+GVr++k +g+W+AeIrd +     + kr++lg+++taeeA +a++  r+++e
  Ote100033630021|100033630021 111 KYRGVRQRK-WGKWAAEIRDpF-----QhKRVWLGTYDTAEEASRAYEMKRLEFE 159
                                   8*******9.**********55.....45**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.29E-25111151No hitNo description
SuperFamilySSF541719.81E-18111158IPR016177DNA-binding domain
PROSITE profilePS5103220.771111168IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-22111158IPR001471AP2/ERF domain
SMARTSM003801.4E-20111176IPR001471AP2/ERF domain
PfamPF008479.5E-14111160IPR001471AP2/ERF domain
PRINTSPR003675.7E-11112123IPR001471AP2/ERF domain
PRINTSPR003675.7E-11134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MLLEPRKPVL LNRESSLNRK AKVKPMRKIR IICSDPYATE SSDDEREVFI EKRVKRVVHE  60
IHLPFSDSIA GSKLLESDSS AQESCNSAKL SKKRRAFSFT EGNQQNPVNG KYRGVRQRKW  120
GKWAAEIRDP FQHKRVWLGT YDTAEEASRA YEMKRLEFEA LASNADLSSD KTPLKQNVKT  180
VTSTVVFCAS EVSSSSIVSA PSQTSSSVSE PDSAVSQKLD AEKQVNNCGL MDEELTALAK  240
MRDELDLSME LESLVGGDGY APSLDDFFDD GLDDFPIFGL DGVDEIDTSL PDFDFDMDMD  300
FGSALAWIDE PVDVMNGASA SLDIACL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-141091521256Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076896.16e-99ethylene-responsive transcription factor ERF118
TrEMBLA0A2G9HYF91e-100A0A2G9HYF9_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351