PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100028310061
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 152aa    MW: 16665.6 Da    PI: 8.5452
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100028310061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.98.9e-132884359
                                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
                                  +l++ +r+++NRe+ArrsR+RK++ +eeL   v+++  +N++    l   +++  ++
  Ote100028310061|100028310061 28 DLRKRKRMISNRESARRSRLRKQKHLEELMAQVAQFRRQNSQILTSLRATTQHHVTV 84
                                  58999***********************************98887777666665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-92476No hitNo description
SMARTSM003381.1E-162690IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.9792891IPR004827Basic-leucine zipper domain
PfamPF001702.2E-102979IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.27E-103081No hitNo description
CDDcd147022.83E-173181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MDSSSGISSN SSGLQNSASE EDLQQVMDLR KRKRMISNRE SARRSRLRKQ KHLEELMAQV  60
AQFRRQNSQI LTSLRATTQH HVTVESENSI LRAQAAELTH RLQSLAEIVA FLSSNEGGAH  120
GFPPDDGAAG GSWNCLSQPI AMMAAADSGL LY
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240546.15e-51PREDICTED: bZIP transcription factor 11-like
RefseqXP_022873027.14e-51bZIP transcription factor 44-like
SwissprotC0Z2L52e-40BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2G9HCZ82e-61A0A2G9HCZ8_9LAMI; Uncharacterized protein
STRINGXP_009619503.11e-49(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]