PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100027850021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

SRS

Protein Properties

Length: 319aa MW: 34902 Da PI: 10.8083

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100027850021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	94	3.1e-29	153	256	46	152
DUF702 46 aakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddg 126 a r e+qqq++++ +++++++++++ ++ ++++ + + l +t++s+++s l + +lP+ev++eavfrcvrvs+vdd Ote100027850021\|100027850021 153 DA-REEHQQQNNNQRLERESKRQRENNSSPSSNRNPNPNPLVCTRISTTTSG--LMVGNLPTEVRAEAVFRCVRVSAVDDT 230 33.5566666666666666777777777777777778888999999998766..667789******************* PP DUF702 127 eeelaYqtavsigGhvfkGiLydqGl 152 ++l+Yqtav+i+Gh+fkGiLydqG+ Ote100027850021\|100027850021 231 ANQLSYQTAVNISGHIFKGILYDQGA 256 ***********************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05142	1.2E-25	154	256	IPR007818	Protein of unknown function DUF702
TIGRFAMs	TIGR01624	5.0E-25	209	255	IPR006511	Lateral Root Primordium type 1, C-terminal

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MEVTQSNTRW PASXXXXXXX XXXXXXPPPA TAPPPIPTNK PPEKSIRRAG SFSEMKRFRT 60 RVSSSGSRSR SAQRIXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXGR 120 RNQLPGLREP GEEGLFAYEV QDLLQKPRVS VPDAREEHQQ QNNNQRLERE SKRQRENNSS 180 PSSNRNPNPN PLVCTRISTT TSGLMVGNLP TEVRAEAVFR CVRVSAVDDT ANQLSYQTAV 240 NISGHIFKGI LYDQGAIAAE TSSGGGSVTA GAAAQNLNSI AGTSAPATSG GSSFVDASLF 300 PAPINSFIAG TQFFPPPRS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011090405.1	9e-48	protein SHI RELATED SEQUENCE 1-like
TrEMBL	A0A4D9AWL5	4e-48	A0A4D9AWL5_SALSN; Uncharacterized protein
STRING	Gorai.002G125600.1	1e-40	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA18294	2	4