PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100026100061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 333aa    MW: 36869.3 Da    PI: 8.5697
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100026100061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.3e-052232611255
                                   HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Ote100026100061|100026100061 223 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 261
                                   7788899*********998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.433211260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.22E-5221265No hitNo description
SuperFamilySSF474596.8E-11221272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-9225268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MAPDIAAYNW PTNATANSTT THHCDQNLQQ HSRIKQELAD QYYRRYADML TQSSSDDLSL  60
RNDLLHNDVA TKFLLKSFSY GNLTSKIHLS PTPDFYSVGN AANARGFTQI SNQMAVTPPV  120
SLDMNLEALD LLASSRFSGN FATSTHNQME ILRDGFSDYG FDHMQQSHQI PFYSSNKVSS  180
ASSNAVVEAK RNSNKMEPKA QFQNAPKKSR LEARSSCPPF KVRKEKLGDR IAALQQLVAP  240
FGKTDTASVL MEAIGYIKFL QNQVETLSVP YMKSSRNKPD RLTKGDPSES ENEESKRDLK  300
SRGLCLVPLS CLSYITDGGG AAVWPPPHFG GAT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020550876.11e-145transcription factor bHLH110 isoform X3
SwissprotQ9SFZ32e-58BH110_ARATH; Transcription factor bHLH110
TrEMBLA0A4D9AVK11e-131A0A4D9AVK1_SALSN; Uncharacterized protein
STRINGMigut.C00762.1.p1e-110(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75332227
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]