PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100025110121

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

NAC

Protein Properties

Length: 378aa MW: 42811.9 Da PI: 5.3194

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100025110121	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	75.1	1.6e-23	90	193	34	128
NAM 34 ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkkt 105 +++ +i+ ++P++Lp +k++ ++++fF k ++y++g+rk+r ++++W++tgk+k++++ +g l+g kk+ Ote100025110121\|100025110121 90 LEDNeGICCTHPENLP-GAKKDGSSVHFFYKVTNAYSNGRRKRRRvqdqdstmKSNARWHKTGKTKPIME-DGILKGFKKI 168 333337********.556778899**************64777776544899********.9***** PP NAM 106 Lvfy..kgrapkgektdWvmheyrl 128 +v+y +++ +k+ k++Wvmh+y+l Ote100025110121\|100025110121 169 MVLYgtSKTGSKPDKCNWVMHQYHL 193 6644566777*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	22.027	51	212	IPR003441	NAC domain
SuperFamily	SSF101941	4.84E-25	83	212	IPR003441	NAC domain
Pfam	PF02365	1.9E-7	100	193	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence Send to blast
MARSWLIDSR GLAKKVINAV AAYQIKDCEA NMQCPNCHHR IDNSDDVVKT VIPVLDRLYS 60 LVLLLEHLAA KRGIGKSDSH VFIDEFIPTL EDNEGICCTH PENLPGAKKD GSSVHFFYKV 120 TNAYSNGRRK RRRVQDQDST MKSNARWHKT GKTKPIMEDG ILKGFKKIMV LYGTSKTGSK 180 PDKCNWVMHQ YHLGTDEDEK EGEFVVSKIT FQPEKATNTN ENPTIVKEEP DVKTVQVIPM 240 TPNTTTPDPP RHDKTPYSDC LYEDYFLDSF LKETEHIKRP SYSFRLGDDE YATCLGANSE 300 ADNLSRGDYL RCNEIIESYA AFGGSSTQVN FDTGLQERDA NASYGICDLY NLELDTAPDF 360 QNLQFDSQDS VFDSLERL

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence Send to blast

MARSWLIDSR GLAKKVINAV AAYQIKDCEA NMQCPNCHHR IDNSDDVVKT VIPVLDRLYS  60
LVLLLEHLAA KRGIGKSDSH VFIDEFIPTL EDNEGICCTH PENLPGAKKD GSSVHFFYKV  120
TNAYSNGRRK RRRVQDQDST MKSNARWHKT GKTKPIMEDG ILKGFKKIMV LYGTSKTGSK  180
PDKCNWVMHQ YHLGTDEDEK EGEFVVSKIT FQPEKATNTN ENPTIVKEEP DVKTVQVIPM  240
TPNTTTPDPP RHDKTPYSDC LYEDYFLDSF LKETEHIKRP SYSFRLGDDE YATCLGANSE  300
ADNLSRGDYL RCNEIIESYA AFGGSSTQVN FDTGLQERDA NASYGICDLY NLELDTAPDF  360
QNLQFDSQDS VFDSLERL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011097382.1	1e-162	SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBL	A0A4D8ZFR3	1e-158	A0A4D8ZFR3_SALSN; Uncharacterized protein
STRING	XP_009799111.1	1e-118	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8175	22	29