PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100022610011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 173aa MW: 19935.3 Da PI: 4.1019 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 93.8 | 2.7e-29 | 8 | 122 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGf+F+Ptdeel+v++L ++++ +++ ++i+++di++++P L++k+ ++kewyfFs ++nr+tk+g Ote100022610011|100022610011 8 LPPGFQFDPTDEELIVNFLYPRATYSPCYP-NIIPHLDINETDPCGLHEKAFWSKKEWYFFSGL--------KQNRVTKKG 79 79*************************888.89**************976667899*****865........679****** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wk+ g ++++++++g +vg+k+ Lvf + g+ ++W+m+e+rl Ote100022610011|100022610011 80 FWKEVGLSENIFTSSGVEVGIKTYLVFC----SGGVDSNWIMEEFRL 122 ***************************9....567889*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.93E-38 | 5 | 139 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 32.434 | 8 | 141 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.8E-19 | 9 | 122 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MGEDQVALPP GFQFDPTDEE LIVNFLYPRA TYSPCYPNII PHLDINETDP CGLHEKAFWS 60 KKEWYFFSGL KQNRVTKKGF WKEVGLSENI FTSSGVEVGI KTYLVFCSGG VDSNWIMEEF 120 RLLNNCALQV QQLVLCRVRD SEEKTKDGDE LSYLDEVFFS MDDDDQDEIS FPT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-28 | 5 | 138 | 14 | 162 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-28 | 5 | 138 | 14 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-28 | 5 | 138 | 14 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-28 | 5 | 138 | 14 | 162 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-28 | 5 | 138 | 17 | 165 | NAC domain-containing protein 19 |
3swm_B | 1e-28 | 5 | 138 | 17 | 165 | NAC domain-containing protein 19 |
3swm_C | 1e-28 | 5 | 138 | 17 | 165 | NAC domain-containing protein 19 |
3swm_D | 1e-28 | 5 | 138 | 17 | 165 | NAC domain-containing protein 19 |
3swp_A | 1e-28 | 5 | 138 | 17 | 165 | NAC domain-containing protein 19 |
3swp_B | 1e-28 | 5 | 138 | 17 | 165 | NAC domain-containing protein 19 |
3swp_C | 1e-28 | 5 | 138 | 17 | 165 | NAC domain-containing protein 19 |
3swp_D | 1e-28 | 5 | 138 | 17 | 165 | NAC domain-containing protein 19 |
4dul_A | 1e-28 | 5 | 138 | 14 | 162 | NAC domain-containing protein 19 |
4dul_B | 1e-28 | 5 | 138 | 14 | 162 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099725.1 | 5e-61 | NAC domain-containing protein 104 | ||||
TrEMBL | A0A4D9A0K9 | 7e-74 | A0A4D9A0K9_SALSN; Uncharacterized protein | ||||
STRING | VIT_04s0044g01500.t01 | 8e-49 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13785 | 12 | 15 |