PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100022510041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Trihelix | ||||||||
Protein Properties | Length: 229aa MW: 26105 Da PI: 10.5502 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 38.9 | 2.3e-12 | 39 | 74 | 1 | 36 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36 rW++qe+laLi++r++m++++r+++lk+plW+evs+ Ote100022510041|100022510041 39 RWSRQETLALIKIRSDMDDAFRDSSLKGPLWQEVSS 74 8*********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MMLGVSGLMS SSXXXXXXXX XXXXXXXXXX XXXXXXXNRW SRQETLALIK IRSDMDDAFR 60 DSSLKGPLWQ EVSSLSETLS LDMILILTLE QFSLRFYHTE NVGAWISTKR QEVQXXXXXX 120 XXXXXXFKYH KRTKDGRASK SDGKTYRFSD ELTALENPPP PSMPLSSLIP TRHIIVSSTA 180 LNPINSPPFQ PXXXXXXXXX XXXXXPRLPT RIYSGGRGRR GNGRISSTD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011074760.1 | 2e-29 | trihelix transcription factor GT-2-like | ||||
TrEMBL | A0A438JVV0 | 9e-27 | A0A438JVV0_VITVI; Trihelix transcription factor GT-2 |