PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100020730111 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | CPP | ||||||||
Protein Properties | Length: 761aa MW: 82312.9 Da PI: 6.0365 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 50.5 | 4.2e-16 | 466 | 504 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C C dC+Nk Ote100020730111|100020730111 466 SCKRCNCKKSKCLKLYCECFAAGVYCVEPCACIDCFNKP 504 689**********************************96 PP | |||||||
2 | TCR | 51.2 | 2.6e-16 | 551 | 589 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN Ote100020730111|100020730111 551 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNA 589 589***********************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 2.6E-18 | 465 | 506 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 36.989 | 466 | 591 | IPR005172 | CRC domain |
Pfam | PF03638 | 6.7E-12 | 468 | 503 | IPR005172 | CRC domain |
SMART | SM01114 | 7.5E-18 | 551 | 592 | IPR033467 | Tesmin/TSO1-like CXC domain |
Pfam | PF03638 | 7.4E-12 | 553 | 589 | IPR005172 | CRC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 761 aa Download sequence Send to blast |
MDTPERSKDS QIATSIGKFE DSPVFNFLNS LSPIKPIKPT HVTQTINPLS FASLPSVFSS 60 PHLSSLKESK FLRRPHLLDP SKPEFSSDDG NMVDTSNLLV HMAAKLVEQK EKLDPRASEC 120 ENAGEPSYES SKLVVEIAES LNCESGMVNS SLSCLKTKHV AECACTSSAC EPFVQEQRNA 180 EISEANLMGS GNLDQSNWDS LICDASYLLG SGSLNTETCG KSVDPATTFY RSIKNAIQNA 240 ESLETVVCGE RVREGREAEN MPNQPGEGTE SIENAGKHDT VIDSSFSNSS QQIDCESLSG 300 IYRGMRRRCL VFEMSGADGK HMEDSSGSDS PTLLRSDDNS SNQQIVHNKR EDDTSRALPG 360 IGLHLNVLAA TSKDFKIVNH ESSASGRLLI GPSSSANLRP ATSGQGLLNN TFSNYSLERE 420 IDTFGSGGLS VEDPSQESGY IANEDVNPGS PKKRRRRLDQ GGDGESCKRC NCKKSKCLKL 480 YCECFAAGVY CVEPCACIDC FNKPIHEDTV LATRKQIESR NPLAFAPKVI RGSDSLPELG 540 DDLTNTPASA RHKRGCNCKK SGCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSGSSS 600 SEPEYKEDEM DTTEKAAHDA GLYRSAIHDD LERCMDSAPP ATPLGTGRQP YQSFSNKRPP 660 RATFPSISSY SGLSVSQPFG KSSLIPAPPK FNPCFETVEE DEMPHFLLGG GGSPIGGIKS 720 SSPNRKRVSP PLRLEVATGL RSSRKLILQS IPSFPSLAPN Q |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5fd3_A | 1e-18 | 468 | 588 | 12 | 120 | Protein lin-54 homolog |
5fd3_B | 1e-18 | 468 | 588 | 12 | 120 | Protein lin-54 homolog |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073448.1 | 0.0 | protein tesmin/TSO1-like CXC 2 isoform X1 | ||||
TrEMBL | A0A4D8Y945 | 0.0 | A0A4D8Y945_SALSN; Uncharacterized protein | ||||
STRING | Migut.G00370.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2467 | 23 | 45 |