PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100019360041

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

NAC

Protein Properties

Length: 531aa MW: 59818.9 Da PI: 4.3104

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100019360041	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.7	4.5e-53	15	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratks 80 ppGfrFhPtdeelv++yLk+k+ ++++ l +vi+e+d+yk++P++Lp +k+k+++++w+fFs+rd+ky++g r+nratk+ Ote100019360041\|100019360041 15 PPGFRFHPTDEELVQYYLKRKICSQRHLL-DVIAETDVYKWDPEELPglSKLKTGDRQWFFFSPRDRKYPNGARSNRATKQ 94 9***********************777.9************6559999*********************** PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gyWkatgkd+ + s ++++vglkktLvfy+grapkge+tdWvmhey++ Ote100019360041\|100019360041 95 GYWKATGKDRVISS-GSRAVGLKKTLVFYRGRAPKGERTDWVMHEYTM 141 *******999.99***************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	6.15E-60	13	164	IPR003441	NAC domain
PROSITE profile	PS51005	57.1	14	164	IPR003441	NAC domain
Pfam	PF02365	1.6E-28	15	140	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence Send to blast
MKVKSGSFGD GDIFPPGFRF HPTDEELVQY YLKRKICSQR HLLDVIAETD VYKWDPEELP 60 GLSKLKTGDR QWFFFSPRDR KYPNGARSNR ATKQGYWKAT GKDRVISSGS RAVGLKKTLV 120 FYRGRAPKGE RTDWVMHEYT MDEVELKRYP AATEYYVLYK VYKKSGPGPK NGEQYGAPFR 180 EEDWADDEVE IQRPVEKESP LNPINEATPI NSTKKTDFQD LLSLDYLEEI MNQLADEPHP 240 VQPALDSYGY NLEQFVGEEE THSSLVDNSP RDICLPAPQL LCQEPSVANS FDLRQSVTSQ 300 FDCSNAPEVY SAQVADLLSS CDIDVAFLED FLELNDLDGD STAQMPDELV NNTEKFQFDD 360 LDCLHEHNLF EDAPLFLSEM GPAESSQASQ PDPNDFRNGA THPTSSTYIN NFENTTSYML 420 QQQSNYSNGI SYQLCTDDQS CRVLTESQTN QAFVPPLSGV LHQNQNIGFV SHSAGANQNG 480 SDKQDDGGRD SWFSSALWSF VXXXXSIPTT PASASESALV MPWQLQEVVA N

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence Send to blast

MKVKSGSFGD GDIFPPGFRF HPTDEELVQY YLKRKICSQR HLLDVIAETD VYKWDPEELP  60
GLSKLKTGDR QWFFFSPRDR KYPNGARSNR ATKQGYWKAT GKDRVISSGS RAVGLKKTLV  120
FYRGRAPKGE RTDWVMHEYT MDEVELKRYP AATEYYVLYK VYKKSGPGPK NGEQYGAPFR  180
EEDWADDEVE IQRPVEKESP LNPINEATPI NSTKKTDFQD LLSLDYLEEI MNQLADEPHP  240
VQPALDSYGY NLEQFVGEEE THSSLVDNSP RDICLPAPQL LCQEPSVANS FDLRQSVTSQ  300
FDCSNAPEVY SAQVADLLSS CDIDVAFLED FLELNDLDGD STAQMPDELV NNTEKFQFDD  360
LDCLHEHNLF EDAPLFLSEM GPAESSQASQ PDPNDFRNGA THPTSSTYIN NFENTTSYML  420
QQQSNYSNGI SYQLCTDDQS CRVLTESQTN QAFVPPLSGV LHQNQNIGFV SHSAGANQNG  480
SDKQDDGGRD SWFSSALWSF VXXXXSIPTT PASASESALV MPWQLQEVVA N

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-49	14	141	15	140	Stress-induced transcription factor NAC1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074131.1	0.0	NAC domain-containing protein 17-like
TrEMBL	A0A2G9I6C6	0.0	A0A2G9I6C6_9LAMI; Uncharacterized protein
STRING	Migut.N02932.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3212	24	51