PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100009660061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 239aa MW: 27645.4 Da PI: 5.6122 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76 | 8.9e-24 | 10 | 80 | 1 | 72 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk 72 lp+GfrFhPt++elvv+yL++k++g+++++ +i+e+d+yk++Pw+Lp ++ +eke+yfFs+rd+ky++ + Ote100009660061|100009660061 10 LPAGFRFHPTNDELVVHYLCRKCAGHPISV-PIIAEIDLYKFDPWQLPGMALYGEKELYFFSPRDRKYPNVR 80 799***************************.88***************66666899************9732 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.42E-32 | 7 | 161 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 27.609 | 10 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.3E-11 | 11 | 108 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MKGGEQQLNL PAGFRFHPTN DELVVHYLCR KCAGHPISVP IIAEIDLYKF DPWQLPGMAL 60 YGEKELYFFS PRDRKYPNVR GRTGLREPVT GRRPEPISLW ESRGLWESRK LWFSTLAKPQ 120 TESKPIGLCT SIAWQMWIAR PANGKISGCL DDWVLCRIYN KKGNLEKHNV VIVDEEEAQF 180 SEMNEHMHFD TSDSEHSQLI CIDNQQLNFM VDGFGDSFLD SQLQQYSQLY AEVQGIDCW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-39 | 7 | 167 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-39 | 7 | 167 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-39 | 7 | 167 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-39 | 7 | 167 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-39 | 7 | 167 | 17 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-39 | 7 | 167 | 17 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-39 | 7 | 167 | 17 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-39 | 7 | 167 | 17 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-39 | 7 | 167 | 17 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-39 | 7 | 167 | 17 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-39 | 7 | 167 | 17 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-39 | 7 | 167 | 17 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-39 | 7 | 167 | 14 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-39 | 7 | 167 | 14 | 171 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the promoter of the stress response gene LEA19. Involved in tolerance to abiotic stresses (PubMed:20632034). Transcription activator involved in response to abiotic and biotic stresses. Involved in drought and salt stress responses, and defense response to the rice blast fungus (PubMed:17587305). Transcription activator involved tolerance to cold and salt stresses (PubMed:18273684). Transcription activator involved in tolerance to drought stress. Targets directly and activates genes involved in membrane modification, nicotianamine (NA) biosynthesis, glutathione relocation, accumulation of phosphoadenosine phosphosulfate and glycosylation in roots (PubMed:27892643). Controls root growth at early vegetative stage through chromatin modification and histone lysine deacytaltion by HDAC1 (PubMed:19453457). {ECO:0000269|PubMed:17587305, ECO:0000269|PubMed:18273684, ECO:0000269|PubMed:19453457, ECO:0000269|PubMed:20632034, ECO:0000269|PubMed:27892643}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress, cold stress and abscisic acid (ABA) (PubMed:20632034, PubMed:27892643). Induced by methyl jasmonate (PubMed:20632034, PubMed:11332734). Induced by infection with the rice blast fungus Magnaporthe oryzae (PubMed:11332734). {ECO:0000269|PubMed:11332734, ECO:0000269|PubMed:20632034, ECO:0000269|PubMed:27892643}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097089.1 | 3e-60 | NAC domain-containing protein 2 | ||||
Refseq | XP_012829076.1 | 3e-60 | PREDICTED: protein ATAF2-like | ||||
Swissprot | Q7F2L3 | 3e-49 | NAC48_ORYSJ; NAC domain-containing protein 48 | ||||
TrEMBL | G8E9N5 | 3e-62 | G8E9N5_SALMI; NAC domain-containing protein 1 | ||||
STRING | Migut.L00568.1.p | 1e-59 | (Erythranthe guttata) |