PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100009260051

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bZIP

Protein Properties

Length: 473aa MW: 51864.2 Da PI: 9.3197

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100009260051	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	66.8	3.8e-21	329	391	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL+ kv++L +eN+aLk+e+++l + ++klk e+ Ote100009260051\|100009260051 329 ERELKRERRKQSNRESARRSRLRKQAETEELAVKVQALNSENMALKSEMNKLMESSEKLKLEN 391 89**********************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07777	2.8E-30	92	184	IPR012900	G-box binding protein, multifunctional mosaic region
Pfam	PF16596	2.2E-10	198	312	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.5E-16	323	388	No hit	No description
Pfam	PF00170	1.7E-19	329	391	IPR004827	Basic-leucine zipper domain
SMART	SM00338	3.3E-18	329	393	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	12.806	331	394	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.88E-10	332	388	No hit	No description
CDD	cd14702	4.67E-19	334	382	No hit	No description
PROSITE pattern	PS00036	0	336	351	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence Send to blast
MLPIQKHKLA VHIIISSLNF CFPFLQIYKN SSISFSTLKP SGGRIAANEF FMVFGYGNLA 60 VNLNCCELHR FGNDIPRFSI RWNIKRVVER IMGNTEEEKV SKLEKSSSPA VDQNNMHVYP 120 DWAAMQAFYG PRFAVPPYMN SAVASPHAAP RYMWGPPQSM IPPYGAPYAA FYAHGGVYAH 180 PGVPMSSHQG IILQTXFVKK LKEFDGLAIS IGNGNSDGTE TGTDRRLSDS EETEGSSDGS 240 NGVAPGTGKK RTGQGSPDGE DAKAHKRSSL AEVSQVCKKM DVIPPAANKP VKVTEKSNGA 300 LDLKDPSLST AKSSSTVSSI PNETWLQNER ELKRERRKQS NRESARRSRL RKQAETEELA 360 VKVQALNSEN MALKSEMNKL MESSEKLKLE NAALIEKLKD AQLGRTAEVN VHKIDDPRLK 420 PLGTANLLAR VNNSESSDVG NDDSDSYENR NSPGAKLHQL LDSSPRTDAV AAS

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence Send to blast

MLPIQKHKLA VHIIISSLNF CFPFLQIYKN SSISFSTLKP SGGRIAANEF FMVFGYGNLA  60
VNLNCCELHR FGNDIPRFSI RWNIKRVVER IMGNTEEEKV SKLEKSSSPA VDQNNMHVYP  120
DWAAMQAFYG PRFAVPPYMN SAVASPHAAP RYMWGPPQSM IPPYGAPYAA FYAHGGVYAH  180
PGVPMSSHQG IILQTXFVKK LKEFDGLAIS IGNGNSDGTE TGTDRRLSDS EETEGSSDGS  240
NGVAPGTGKK RTGQGSPDGE DAKAHKRSSL AEVSQVCKKM DVIPPAANKP VKVTEKSNGA  300
LDLKDPSLST AKSSSTVSSI PNETWLQNER ELKRERRKQS NRESARRSRL RKQAETEELA  360
VKVQALNSEN MALKSEMNKL MESSEKLKLE NAALIEKLKD AQLGRTAEVN VHKIDDPRLK  420
PLGTANLLAR VNNSESSDVG NDDSDSYENR NSPGAKLHQL LDSSPRTDAV AAS

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By light.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011093357.1	0.0	common plant regulatory factor 1 isoform X3
Swissprot	Q99089	1e-115	CPRF1_PETCR; Common plant regulatory factor 1
TrEMBL	A0A4D9AHM7	0.0	A0A4D9AHM7_SALSN; Plant G-box-binding factor
STRING	Migut.B01828.1.p	1e-164	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3113	24	47

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115] Feldbrügge M,Hahlbrock K,Weisshaar B The transcriptional regulator CPRF1: expression analysis and gene structure. Mol. Gen. Genet., 1996. 251(6): p. 619-27 [PMID:8757392]