PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100008310011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 415aa    MW: 45798.8 Da    PI: 8.2807
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100008310011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-09138179546
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                                   k   ++++NReAArrsR RKk++++eLe   + L +  +aL+
  Ote100008310011|100008310011 138 KELVKLAQNREAARRSRMRKKEYVKELECSQQRLAQLDHALR 179
                                   66789**********************988888777777776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-4134198IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.531136180IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.69E-7138182No hitNo description
PfamPF001705.1E-7138180IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-8142186No hitNo description
PROSITE patternPS000360142156IPR004827Basic-leucine zipper domain
PfamPF141446.4E-10220274IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MYSHPQSPFY MRGDGIGKDG DVAELLQSAG NVFHDLDTPD ITTICSIYNG IKASNVSVES  60
SNSQFGGIPK SCGSAVEKGH FLMDKGGNIQ PSGTSRNAHF YSSQSETLTN NDARKNQSAG  120
LVAGDSRDQS KGRVRGQKEL VKLAQNREAA RRSRMRKKEY VKELECSQQR LAQLDHALRR  180
GRKQVSSRFS GYQKNSISGS GSVAFDTDQA SWAEEHQTLI DDLRWGLNSD AGDTQLHLLV  240
DAVISHYDQL LLIKKSGAKT DMFHILSGVW LSPVCTATIN QDPKFHYELL IPPSQVLEKK  300
IQPLTEQQLV GICNLQQSCQ EAEDALSQGM EALQLSLVET LSPTSDYMTQ MAVAMTKIAT  360
IQNFLNQADL LRLHTLQQLQ RILTTRQAAC ALLAVNNYKS KLRALSSLWL ALPKG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077152.11e-136transcription factor HBP-1b(c38)-like
SwissprotP239238e-96HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLA0A4D9A4X81e-123A0A4D9A4X8_SALSN; Transcription factor TGA
STRINGVIT_01s0011g03230.t011e-114(Vitis vinifera)
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]