PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100005820021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ARR-B
Protein Properties Length: 212aa    MW: 24508.2 Da    PI: 6.5168
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100005820021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like66.64.2e-21163209451
                       G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                                   ++Wt+eLHe+F++aveqL G+    Pk+ilelm+v+gLt+ +v+SHLQ
  Ote100005820021|100005820021 163 IEWTQELHEKFMNAVEQL-GEGSCFPKEILELMNVPGLTRMQVASHLQ 209
                                   68****************.99*************************** PP
2Response_reg241.9e-0937835108
                                   HHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE..STTTHHHHHHHHHTTESEEEESS--HHHHH CS
                  Response_reg  35 alellkekd..pDlillDiempgmdGlellkeireeepklpiivvt..ahgeeedalealkaGakdflsKpfdpeelv 108
                                   a+++l + +  +D ++  i+ p++++++ll+   + +  +pii+++    ++  +a+++++ Ga  ++  p+ +e ++
  Ote100005820021|100005820021   3 AMQILTNGKskFDFVIANINSPDVQAFKLLQLAVSID--IPIIMMSvgIDDDTIMATKVIEIGAFLYIKRPTTIEMIR 78 
                                   56666544445*******************9877766..******9634445889999**************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011015.64185IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521723.08E-8387IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23007.1E-93102No hitNo description
PROSITE profilePS5129411.113153212IPR017930Myb domain
SuperFamilySSF466894.3E-15159210IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.8E-20160209IPR009057Homeodomain-like
TIGRFAMsTIGR015574.7E-19163210IPR006447Myb domain, plants
PfamPF002493.5E-8165209IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MAAMQILTNG KSKFDFVIAN INSPDVQAFK LLQLAVSIDI PIIMMSVGID DDTIMATKVI  60
EIGAFLYIKR PTTIEMIRCL WQHVARDNIR VMREHERLMA ANYAATHGIE MNQYSDENPN  120
NLLTMKEKGK FKRKYSNGRE MEEEYDSENN RSNHERVRRK VCIEWTQELH EKFMNAVEQL  180
GEGSCFPKEI LELMNVPGLT RMQVASHLQV NN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079700.14e-78two-component response regulator ARR14-like
TrEMBLA0A4D8ZBA41e-77A0A4D8ZBA4_SALSN; Two-component response regulator ARR-B family
STRINGMigut.D00936.1.p3e-57(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384