PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100004440121
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 560aa    MW: 62572.7 Da    PI: 4.6687
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100004440121genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.98e-53181442128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratks 80 
                                    pGfrFhPtdeelv++yL++kv+gk +++ e+i++vd+yk+ePwdLp  +k+k+++ ewyfFs  dkky +g r+nrat++
  Ote100004440121|100004440121  18 GPGFRFHPTDEELVQFYLRRKVSGKAFRF-EAITDVDVYKIEPWDLPyvSKLKTRDLEWYFFSFLDKKYGNGARTNRATEK 97 
                                   59*************************99.89***************5447888888************************ PP

                           NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   gyWk+tgkd++v++ k++ vg+kktLv++ grapkg++++Wvmheyrl
  Ote100004440121|100004440121  98 GYWKTTGKDRAVYH-KKQIVGMKKTLVYHCGRAPKGQRSNWVMHEYRL 144
                                   **************.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-6112167IPR003441NAC domain
PROSITE profilePS5100556.8317167IPR003441NAC domain
PfamPF023651.9E-2719144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009819Biological Processdrought recovery
GO:0010150Biological Processleaf senescence
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    Send to blast
MESKTGRKKP SRPLSMLGPG FRFHPTDEEL VQFYLRRKVS GKAFRFEAIT DVDVYKIEPW  60
DLPYVSKLKT RDLEWYFFSF LDKKYGNGAR TNRATEKGYW KTTGKDRAVY HKKQIVGMKK  120
TLVYHCGRAP KGQRSNWVMH EYRLVGSDME TAGVAQDAFV VCRIFQKSGS GPKNGEQYGA  180
PFVEEDWDND ELESVPQDDA TEEVDFGDNA CLDSNDLHHL QQMLGSDVPL NTAPPVSFDS  240
TDNSHFGKAM SFGSTQDHLV PADACNCEPK ICYDQNIQNS LASYDVNDTT VKKECFGERN  300
KSGDSDEFNF LLNDPFFDSF NELPTGDEGF IEANDLSNPF ETTTNALDML EEYLDASDDS  360
SFYLASDPEM IFGTDDLVSN QTLLPQADMG NGTEQSVLPM GQLINNNNNF DAAISPENPG  420
LAEYQSGFEY PYIRKTSQML GNIQAPPAFA AEFPSKDAIL RLSSITGSPP RSSSSTVEIR  480
KWKMGKRGGG RENEKLNVVV SFGFSHGDDG SSSLESSVRI VRGTWKTAAA TSSMGWLCFI  540
SLWILVLSLA FRFGTYIRLN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-461317311171NO APICAL MERISTEM PROTEIN
1ut4_B5e-461317311171NO APICAL MERISTEM PROTEIN
1ut7_A5e-461317311171NO APICAL MERISTEM PROTEIN
1ut7_B5e-461317311171NO APICAL MERISTEM PROTEIN
3swm_A5e-461317314174NAC domain-containing protein 19
3swm_B5e-461317314174NAC domain-containing protein 19
3swm_C5e-461317314174NAC domain-containing protein 19
3swm_D5e-461317314174NAC domain-containing protein 19
3swp_A5e-461317314174NAC domain-containing protein 19
3swp_B5e-461317314174NAC domain-containing protein 19
3swp_C5e-461317314174NAC domain-containing protein 19
3swp_D5e-461317314174NAC domain-containing protein 19
4dul_A5e-461317311171NAC domain-containing protein 19
4dul_B5e-461317311171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00343DAPTransfer from AT3G10500Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843323.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A2G9I3Z20.0A0A2G9I3Z2_9LAMI; Uncharacterized protein
STRINGMigut.F01687.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450