PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100001190031
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family CPP
Protein Properties Length: 306aa    MW: 33475.9 Da    PI: 4.9814
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100001190031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR52.21.2e-161554140
                           TCR  1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
                                  k++kgC+Ckks+ClkkYCeCf+a+  Cse+CkC dCkN e
  Ote100001190031|100001190031 15 KHNKGCHCKKSECLKKYCECFQANILCSENCKCMDCKNYE 54
                                  589***********************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5163419.987155IPR005172CRC domain
SMARTSM011142.2E-191556IPR033467Tesmin/TSO1-like CXC domain
PfamPF036389.7E-131853IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MHMQEEAGEV LVSGKHNKGC HCKKSECLKK YCECFQANIL CSENCKCMDC KNYEGSEERQ  60
ALFHGEHANN IIYIQQAANA AITGAIGSSG YGSPPLNKKR KGQDLVYGST MKDPLHLLEQ  120
FQQVNQIKAL VSSPLLPSIP DAGPSNASVI NPSKFTYRSL LADIIQPQDL KELCSVLVVY  180
SGEAARILAA ERVQSKDPLC ESEVERTNLE ESGSDGADVS KGRPMSLSTL AVMCDEEDTA  240
FTSIPSSNGL PECNDQSQLN IEQGLTEGYS EQERIILTQF RECLNKLITV GEIKGKPHSQ  300
TLLCII
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A2e-13156483132Protein lin-54 homolog
5fd3_B2e-13156483132Protein lin-54 homolog
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078441.11e-147protein tesmin/TSO1-like CXC 5
SwissprotQ9SZD11e-98TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A4D9BNC31e-163A0A4D9BNC3_SALSN; Uncharacterized protein
STRINGMigut.K00502.1.p1e-127(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24012455