PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100001190021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | CPP | ||||||||
Protein Properties | Length: 259aa MW: 28892.8 Da PI: 8.4158 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 47.8 | 2.8e-15 | 138 | 177 | 2 | 42 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C +C+N+ e+ Ote100001190021|100001190021 138 KQKQCNCKHSRCLKLYCECFASGVYCDG-CNCVNCHNNVEN 177 89**************************.********9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 1.8E-17 | 137 | 177 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 18.8 | 138 | 259 | IPR005172 | CRC domain |
Pfam | PF03638 | 3.5E-12 | 139 | 174 | IPR005172 | CRC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MEQREAGDFS PNKQRPPQSE DSSPAPSDFP ARKPARQLDF TGFSGGPAAS SPEQPQLAPP 60 RQPAAQQSQP AESSRPPQML FMTMXXXXXX XCAFGPPFDT LSVDDFNPTL TFVIGKPESP 120 RSRPRQNLTE VKDGTPKKQK QCNCKHSRCL KLYCECFASG VYCDGCNCVN CHNNVENEAA 180 RREAVEATLE RNPNAFRPKI ASSPHGARDI MKLLSFSYNF VNSTILHTTA SRYFWLAFGV 240 LLLVNVNNGD KRKNLEFWT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011078441.1 | 9e-82 | protein tesmin/TSO1-like CXC 5 | ||||
Swissprot | Q9SZD1 | 5e-53 | TCX5_ARATH; Protein tesmin/TSO1-like CXC 5 | ||||
TrEMBL | A0A4D9C5L5 | 3e-87 | A0A4D9C5L5_SALSN; Uncharacterized protein | ||||
STRING | Migut.K00502.1.p | 1e-76 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2401 | 24 | 55 |