PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

fgenesh1_pg.C_Chr_07.0001000033

Common Name

OT_ostta07g00490

Organism

Ostreococcus tauri

Taxonomic ID

70448

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus

Family

bZIP

Protein Properties

Length: 383aa MW: 39376.9 Da PI: 10.7411

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
fgenesh1_pg.C_Chr_07.0001000033	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.5	1.2e-12	234	271	3	40
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 +l+r+rr+ +NRe+ArrsR+RK++ ++ Le k++ L+a fgenesh1_pg.C_Chr_07.0001000033 234 DLRRQRRMLSNRESARRSRRRKLEHVATLESKIARLQA 271 799*******************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-9	232	296	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.3E-10	234	271	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.473	234	272	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.91E-8	235	280	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.7E-9	236	308	No hit	No description
PROSITE pattern	PS00036	0	239	254	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence Send to blast
MDRVPSADDL MSALMWRTAH HAHQNGPNGG QGNALTPGVA RTPSQNEMES YYAAMMANAA 60 AGGSGGAMSE QFFAGLGGAS GSAPNSREGT PGIPRVASID VLRKMIIGGG YGGGAVPGQG 120 NASPGSMTPT TAPAISGFAS GANLSALGQL GAAAAEAAAQ GGETTTTGRG AKRGAKKAAA 180 KAPPAKKAKA AVAKSVAKGK NGVSEKSVTK GSTELDDDHD SDGQSHQDGD GTNDLRRQRR 240 MLSNRESARR SRRRKLEHVA TLESKIARLQ ADWQATLHHA RAADARVSEL VRENAAIRAE 300 RDRLLQILRE QGPPGGNVTT PKTGTALERK SSLQRISSNG DLKGELGKGS PTIGSGSGFV 360 PFRSLQSYEN LLALQEAKEG KK*

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence Send to blast

MDRVPSADDL MSALMWRTAH HAHQNGPNGG QGNALTPGVA RTPSQNEMES YYAAMMANAA  60
AGGSGGAMSE QFFAGLGGAS GSAPNSREGT PGIPRVASID VLRKMIIGGG YGGGAVPGQG  120
NASPGSMTPT TAPAISGFAS GANLSALGQL GAAAAEAAAQ GGETTTTGRG AKRGAKKAAA  180
KAPPAKKAKA AVAKSVAKGK NGVSEKSVTK GSTELDDDHD SDGQSHQDGD GTNDLRRQRR  240
MLSNRESARR SRRRKLEHVA TLESKIARLQ ADWQATLHHA RAADARVSEL VRENAAIRAE  300
RDRLLQILRE QGPPGGNVTT PKTGTALERK SSLQRISSNG DLKGELGKGS PTIGSGSGFV  360
PFRSLQSYEN LLALQEAKEG KK*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022839348.1	0.0	Basic-leucine zipper domain
TrEMBL	A0A090M8X9	0.0	A0A090M8X9_OSTTA; Basic-leucine zipper domain
TrEMBL	A0A454XK82	0.0	A0A454XK82_OSTTA; Uncharacterized protein
STRING	A0A090M8X9	0.0	(Ostreococcus tauri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP8223	5	5

Publications ? help Back to Top
Derelle E, et al. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc. Natl. Acad. Sci. U.S.A., 2006. 103(31): p. 11647-52 [PMID:16868079]