PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 0400010301
Organism
Ostreococcus tauri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Family Dof
Protein Properties Length: 515aa    MW: 55823.9 Da    PI: 9.8863
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
0400010301genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof103.31.4e-32121178461
      zf-Dof   4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                  + +cprC+s++tkfCyynny+++qPr++Ck+C ryWt+GG lrnv vG+grrk+k++
  0400010301 121 YTPQCPRCKSEDTKFCYYNNYNIKQPRFYCKECCRYWTEGGLLRNVRVGAGRRKSKSA 178
                 5679***************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-18116176IPR003851Zinc finger, Dof-type
PfamPF027011.4E-27123177IPR003851Zinc finger, Dof-type
PROSITE profilePS5088425.341123177IPR003851Zinc finger, Dof-type
PROSITE patternPS013610125161IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:1902455Biological Processnegative regulation of stem cell population maintenance
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MRARGANARD GTSVVVVRDD GRDDARGAKG QGASGLDAIF AAIPENELRS TDNANEKKMT  60
HEKRTSKRRE GERESAEARA KTNAAASTPV VSQRRGEEGR KATAKVDAKG KAREPLPKPE  120
YTPQCPRCKS EDTKFCYYNN YNIKQPRFYC KECCRYWTEG GLLRNVRVGA GRRKSKSAKD  180
KEAANTVTDK PAVGDDALGA KRSRRTGDDN RGREKSARNQ KRDGSSDGSA TEAEQGEGTF  240
EYARGFPHGS NTGSDTAVRG RSPPEEQGSA EGEGSQRPGD HMRFLGGWGI DPSVARYVST  300
GLLPPNDDAI QAQAAAAAAA SAAILNEATR WGMHFWNKQS TFPYNMPSSS STSTMSEFPG  360
NAQVGRGGVP TPIALAALKC ERVAQPTPLH PTAAAAASTY GTVPRTQGTT TPTTAVMPSS  420
PMAMQYVSMF QNPWAQFCVH SDKGNKCLTS KWRTLCSYTE ECSPRSEVFQ ARRSHSRVHN  480
HSSRKVKAKQ SPLSEDKTLA NNLQNVEYRC DANI*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00394DAPTransfer from AT3G47500Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022838781.10.0Zinc finger, Dof-type
TrEMBLA0A090M0120.0A0A090M012_OSTTA; Zinc finger, Dof-type
TrEMBLA0A454XNQ90.0A0A454XNQ9_OSTTA; Dof domain, zinc finger-domain-containing protein
STRINGA0A090M0120.0(Ostreococcus tauri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP46551111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34140.13e-24Dof family protein