Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 21.8 | 4.9e-07 | 230 | 251 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
C++Cgk F+r nL+ H+r H
LOC_Os12g07280.1 230 FCGICGKGFKRDANLRMHMRGH 251
6*******************98 PP
|
2 | zf-C2H2 | 10.7 | 0.0017 | 319 | 342 | 1 | 23 |
EEETTTT.EEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23
++C+ Cg k+Fs +Lk+H + +
LOC_Os12g07280.1 319 HVCGRCGaKRFSVMADLKTHEKHC 342
79******************9876 PP
|
3 | zf-C2H2 | 10.9 | 0.0014 | 351 | 365 | 6 | 20 |
TTEEESSHHHHHHHH CS
zf-C2H2 6 CgksFsrksnLkrHi 20
Cg+sFsrk+ L H
LOC_Os12g07280.1 351 CGTSFSRKDKLFAHV 365
**************7 PP
|
Publications
? help Back to Top |
- Rice Chromosomes 11 and 12 Sequencing Consortia
The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications. BMC Biol., 2005. 3: p. 20 [PMID:16188032] - Yamaji N, et al.
A zinc finger transcription factor ART1 regulates multiple genes implicated in aluminum tolerance in rice. Plant Cell, 2009. 21(10): p. 3339-49 [PMID:19880795] - Xia J,Yamaji N,Kasai T,Ma JF
Plasma membrane-localized transporter for aluminum in rice. Proc. Natl. Acad. Sci. U.S.A., 2010. 107(43): p. 18381-5 [PMID:20937890] - Tsutsui T,Yamaji N,Feng Ma J
Identification of a cis-acting element of ART1, a C2H2-type zinc-finger transcription factor for aluminum tolerance in rice. Plant Physiol., 2011. 156(2): p. 925-31 [PMID:21502187] - Famoso AN, et al.
Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping. PLoS Genet., 2011. 7(8): p. e1002221 [PMID:21829395] - Yokosho K,Yamaji N,Ma JF
An Al-inducible MATE gene is involved in external detoxification of Al in rice. Plant J., 2011. 68(6): p. 1061-9 [PMID:21880027] - Huang CF,Yamaji N,Chen Z,Ma JF
A tonoplast-localized half-size ABC transporter is required for internal detoxification of aluminum in rice. Plant J., 2012. 69(5): p. 857-67 [PMID:22035218] - Chen ZC,Yamaji N,Motoyama R,Nagamura Y,Ma JF
Up-regulation of a magnesium transporter gene OsMGT1 is required for conferring aluminum tolerance in rice. Plant Physiol., 2012. 159(4): p. 1624-33 [PMID:22732245] - Tsutsui T, et al.
Comparative genome-wide transcriptional analysis of Al-responsive genes reveals novel Al tolerance mechanisms in rice. PLoS ONE, 2012. 7(10): p. e48197 [PMID:23110212] - Chen ZC, et al.
Adaptation to acidic soil is achieved by increased numbers of cis-acting elements regulating ALMT1 expression in Holcus lanatus. Plant J., 2013. 76(1): p. 10-23 [PMID:23773148] - Xia J,Yamaji N,Ma JF
A plasma membrane-localized small peptide is involved in rice aluminum tolerance. Plant J., 2013. 76(2): p. 345-55 [PMID:23888867] - Yokosho K,Yamaji N,Fujii-Kashino M,Ma JF
Functional Analysis of a MATE Gene OsFRDL2 Revealed its Involvement in Al-Induced Secretion of Citrate, but a Lower Contribution to Al Tolerance in Rice. Plant Cell Physiol., 2016. 57(5): p. 976-85 [PMID:26872836] - Che J,Yamaji N,Shen RF,Ma JF
An Al-inducible expansin gene, OsEXPA10 is involved in root cell elongation of rice. Plant J., 2016. 88(1): p. 132-142 [PMID:27302336] - Yokosho K,Yamaji N,Fujii-Kashino M,Ma JF
Retrotransposon-Mediated Aluminum Tolerance through Enhanced Expression of the Citrate Transporter OsFRDL4. Plant Physiol., 2016. 172(4): p. 2327-2336 [PMID:27744299]
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