PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os08g43600.1 | ||||||||
Common Name | LOC9272719, OJ1479_B11.14, Os08g0549600, OsJ_28195, OSNPB_080549600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 147aa MW: 15433.1 Da PI: 8.7343 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.3 | 1.1e-15 | 72 | 127 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r rr++kNRe+A rsR+RK+a+++eLe++v L aeN aL+ + +lk +a+ + LOC_Os08g43600.1 72 RRKRRAMKNRESAERSRARKQAYLQELEQEVRLLRAENAALRHQCHQLKAAAAEAE 127 699**********************************************9988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-11 | 68 | 132 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.553 | 70 | 120 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 6.57E-16 | 72 | 120 | No hit | No description |
Pfam | PF00170 | 2.9E-13 | 72 | 122 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.8E-13 | 72 | 125 | No hit | No description |
SuperFamily | SSF57959 | 2.95E-11 | 72 | 121 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 75 | 90 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0020104 | anatomy | leaf sheath |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MERAAGTGSG GDDDELVLPP ASFQDGLPSS RSYPSCIGGG SAAAASASLE RELLYRAELH 60 QQQLGGGGGV ERRKRRAMKN RESAERSRAR KQAYLQELEQ EVRLLRAENA ALRHQCHQLK 120 AAAAEAEAEA AAAAAAAKKP TSSATF* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.78377 | 0.0 | panicle |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | Q6ZJI7 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os08g43600.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os08g43600 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CT836023 | 0.0 | CT836023.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN045B18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015649649.1 | 3e-98 | protein ABSCISIC ACID-INSENSITIVE 5 | ||||
TrEMBL | A0A0E0IFI0 | 8e-97 | A0A0E0IFI0_ORYNI; Uncharacterized protein | ||||
TrEMBL | Q6ZJI7 | 8e-97 | Q6ZJI7_ORYSJ; Os08g0549600 protein | ||||
STRING | OS08T0549600-00 | 1e-97 | (Oryza sativa) | ||||
STRING | ONIVA08G25910.1 | 1e-97 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15193 | 17 | 19 | Representative plant | OGRP9528 | 5 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36270.1 | 2e-08 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os08g43600.1 |
Entrez Gene | 9272719 |