PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os07g44950.1 | ||||||||
Common Name | LOC4344086, OJ1003_C06.133, OJ1458_B07.101, Os07g0644100, OSNPB_070644100 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 569aa MW: 60071.6 Da PI: 5.6826 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.6 | 1.7e-15 | 111 | 171 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e kr r+ +NRe+A sRqRKk+++eeLe kvk+++a +L +++ + e a+lk+++ LOC_Os07g44950.1 111 EAKRRARLVRNRESAHQSRQRKKQYVEELEGKVKVMQATIADLTARISCVTAENAALKQQL 171 78********************************************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.0E-14 | 109 | 173 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.415 | 111 | 171 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.8E-14 | 111 | 171 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.0E-17 | 113 | 171 | No hit | No description |
SuperFamily | SSF57959 | 9.38E-14 | 113 | 171 | No hit | No description |
CDD | cd14704 | 6.81E-22 | 114 | 165 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 117 | 131 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0009089 | anatomy | endosperm | ||||
PO:0007042 | developmental stage | whole plant fruit formation stage | ||||
PO:0007633 | developmental stage | endosperm development stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 569 aa Download sequence Send to blast |
MAEPDLLAPF ADLPFPPGDD FPDFPTLGDD AFALEDFDLD DLDFDFDVDL FPPDAPPPVT 60 TSSSSSAAGS PEAGTSSAGD GGSKNEESAD SSSPSRSGSD GGGGKDGKDD EAKRRARLVR 120 NRESAHQSRQ RKKQYVEELE GKVKVMQATI ADLTARISCV TAENAALKQQ LGGAAGAGAA 180 APPPPMPMYP AVYPLPMPWI HPAYAMRGSQ VPLVPIPRLK TQQPASTPEP PAKKARKTKK 240 VAGVSLLGLL FLMMVCGCLV PAVNRMYGAA YTGEGAAIVP SHHGRILAVE GPQNSVSNGV 300 DPKVPQNGSE TLPALLYLPR NGKHVKINGN LVIKSIVASE KASSRLSNYG EKGSGNQGKE 360 ETSLAIPGYV APLEAGEVMD SAKGMNELMA LAPGDGSIYR EDDGMLPQWF SEAMSGPMLN 420 SGMCTEVFQF DLSPTTADAN GIVPVYSGSV TNTSQNYTEN LPSGPVQKVK NRRISYSEAI 480 PLRGSTSNDT DHFKAPPKNH SQSHAGRKPV SSVVVSVLAD PREASDRDGE GRISSNSLSR 540 IFVVVLIDSV KYVTYSCVLP FKSHSPHL* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.100467 | 0.0 | callus| flower| leaf| panicle| root |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 37991521 | 0.0 | ||||
Expression Atlas | Q8LIB3 | - |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os07g44950.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305|PubMed:22050533}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os07g44950 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK121898 | 0.0 | AK121898.1 Oryza sativa Japonica Group cDNA clone:J033105F09, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015647746.1 | 0.0 | bZIP transcription factor 60 | ||||
Swissprot | Q8LIB3 | 0.0 | BZP60_ORYSJ; bZIP transcription factor 60 | ||||
TrEMBL | A0A0E0QBY0 | 0.0 | A0A0E0QBY0_ORYRU; Uncharacterized protein | ||||
STRING | OS07T0644100-01 | 0.0 | (Oryza sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11179 | 30 | 35 | Representative plant | OGRP2171 | 16 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-68 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os07g44950.1 |
Entrez Gene | 4344086 |