PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os07g03220.1 | ||||||||
Common Name | OJ1007_H09.109, Os07g0124300, OSNPB_070124300, P0474G09.109 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 192aa MW: 19771 Da PI: 11.2135 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.2 | 3.5e-13 | 72 | 122 | 1 | 51 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 e++++r rrk++NRe+ArrsR+R+++++eeLe+ ++eL ae++aL+++l+ LOC_Os07g03220.1 72 EERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDA 122 68899*******************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.5E-10 | 71 | 123 | No hit | No description |
SMART | SM00338 | 2.1E-7 | 72 | 136 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.8E-8 | 72 | 122 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.013 | 74 | 137 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.04E-7 | 76 | 127 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 79 | 94 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MPLDFGLPDM DVGFGLFGVD AAAFGYDGVA SDAAAGLSPV VGAGDGSGGG GDVLLYCDGG 60 GGGGGGGEDG EEERRRRLRR KISNRESARR SRARRRQRVE ELERAADELR AERRALASRL 120 DATARRALAV RGANARHHAE AGVLRRRLGE AQRNAAVLIG LSRLLRSTAN GAHGGAAPAQ 180 LSNGGVASLM T* |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | Q7XIZ3 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os07g03220.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os07g03220 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP003702 | 0.0 | AP003702.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1007_H09. | |||
GenBank | AP005309 | 0.0 | AP005309.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0474G09. | |||
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | B8B6V5 | 1e-124 | B8B6V5_ORYSI; Uncharacterized protein | ||||
TrEMBL | Q7XIZ3 | 1e-124 | Q7XIZ3_ORYSJ; Os07g0124300 protein | ||||
STRING | OS07T0124300-00 | 1e-125 | (Oryza sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP16831 | 9 | 9 |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os07g03220.1 |