PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os06g50830.2 | ||||||||
Common Name | Os06g0724000, OSNPB_060724000 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 151aa MW: 16633.9 Da PI: 9.0051 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.2 | 3.5e-08 | 95 | 119 | 3 | 27 |
XXCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkae 27 +++r++r+++NRe+A rsR+RK+ + LOC_Os06g50830.2 95 DDRRTIRMMRNRESALRSRARKRVR 119 589*******************865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-5 | 93 | 120 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0009066 | anatomy | anther | ||||
PO:0001004 | developmental stage | anther development stage | ||||
PO:0007130 | developmental stage | sporophyte reproductive stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
MANYHHQEYY QMAAAAAVAW PREPDSPQLS IMSGCSSLFS ISTLRDDDDG GGVRLAGAAL 60 PATPVSLAGI AGGASTPGGD EVDMEVRQQS GGSGDDRRTI RMMRNRESAL RSRARKRVRT 120 YIQYQIRIII RIILQYLCTY VFITYGMNYY * |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.55915 | 0.0 | callus| flower| leaf| root| seed |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | A0A0P0X170 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os06g50830.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os06g50830 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK289259 | 0.0 | AK289259.1 Oryza sativa Japonica Group cDNA, clone: J100084H14, full insert sequence. | |||
GenBank | AP006065 | 0.0 | AP006065.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0076I16. | |||
GenBank | AP007231 | 0.0 | AP007231.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0535F09. | |||
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015642449.1 | 8e-77 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643092.1 | 8e-77 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643093.1 | 8e-77 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643094.1 | 8e-77 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643106.1 | 8e-77 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643107.1 | 8e-77 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
TrEMBL | A0A0P0X170 | 1e-106 | A0A0P0X170_ORYSJ; Os06g0724000 protein | ||||
STRING | OS06T0719500-00 | 4e-76 | (Oryza sativa) | ||||
STRING | OS06T0720900-01 | 2e-76 | (Oryza sativa) |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os06g50830.2 |