PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os06g50830.1 | ||||||||
Common Name | Os06g0719500, OSNPB_060719500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 168aa MW: 18258.6 Da PI: 8.7084 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 57.8 | 2.4e-18 | 95 | 152 | 3 | 60 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +++r++r+++NRe+A rsR+RK+a++eeLe++v L N Lkk+ +elk+eva+l LOC_Os06g50830.1 95 DDRRTIRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCKELKQEVAALV 152 589***************************************************9886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-16 | 93 | 151 | No hit | No description |
SMART | SM00338 | 4.6E-15 | 93 | 157 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.783 | 95 | 151 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.4E-15 | 96 | 152 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.24E-18 | 97 | 151 | No hit | No description |
SuperFamily | SSF57959 | 4.11E-13 | 97 | 151 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0009047 | anatomy | stem | ||||
PO:0007010 | developmental stage | whole plant fruit ripening stage | ||||
PO:0007130 | developmental stage | sporophyte reproductive stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MANYHHQEYY QMAAAAAVAW PREPDSPQLS IMSGCSSLFS ISTLRDDDDG GGVRLAGAAL 60 PATPVSLAGI AGGASTPGGD EVDMEVRQQS GGSGDDRRTI RMMRNRESAL RSRARKRAYV 120 EELEKEVRRL VDDNLNLKKQ CKELKQEVAA LVMPTKSSLR RTSSTQF* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.55915 | 0.0 | callus| flower| leaf| root| seed |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | A0A0P0X1A0 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os06g50830.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os06g50830 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK243144 | 0.0 | AK243144.1 Oryza sativa Japonica Group cDNA, clone: J100032B03, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015642449.1 | 1e-121 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643092.1 | 1e-121 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643093.1 | 1e-121 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643094.1 | 1e-121 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643106.1 | 1e-121 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643107.1 | 1e-121 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
TrEMBL | A0A0P0X1A0 | 1e-119 | A0A0P0X1A0_ORYSJ; Os06g0719500 protein (Fragment) | ||||
STRING | OS06T0719500-00 | 1e-120 | (Oryza sativa) | ||||
STRING | OS06T0720900-01 | 1e-120 | (Oryza sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 | Representative plant | OGRP9528 | 5 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-11 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os06g50830.1 |