PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os06g10880.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 219aa MW: 23829.5 Da PI: 9.9601 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.8 | 1.3e-14 | 138 | 190 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk.eleelkkev 56 +r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++ +L+k ++e+++k+ LOC_Os06g10880.3 138 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQKAELQKkQVEMIQKQN 190 79*************************************99741455555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.1E-13 | 134 | 199 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.657 | 136 | 181 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.0E-12 | 138 | 191 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 6.97E-23 | 138 | 185 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.4E-15 | 138 | 194 | No hit | No description |
SuperFamily | SSF57959 | 1.63E-10 | 138 | 188 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 141 | 156 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MELPADGSAL ARQGSIYSLT FDEFQSALGS AEKDFGSMNM DELLRNIWTA EESQALFPGS 60 NVVAPAMQLA NGMLPGVVGV APGAAAAMTV AAPATPVVLN GLGKVEGGDL SSLSPVPYPF 120 DTALRVRKGP TVEKVVERRQ RRMIKNRESA ARSRARKQAY IMELEAEVAK LKEQKAELQK 180 KQVEMIQKQN DEVMERITQQ LGPKAKRFCL RRTLTGPW* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.54299 | 0.0 | callus| flower| leaf| panicle| root |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 32988397 | 0.0 |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots, leaves, flag leaves, stems, flowers and panicles (PubMed:20576316). Widely expressed (PubMed:21546455). {ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130, ECO:0000269|PubMed:26300907, ECO:0000269|PubMed:27468891}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os06g10880.3 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os06g10880 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK103188 | 0.0 | AK103188.1 Oryza sativa Japonica Group cDNA clone:J033121M03, full insert sequence. | |||
GenBank | AK105312 | 0.0 | AK105312.1 Oryza sativa Japonica Group cDNA clone:001-117-D06, full insert sequence. | |||
GenBank | GU552783 | 0.0 | GU552783.1 Oryza sativa Japonica Group putative expressed bZIP transcription factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015693494.1 | 1e-128 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
Swissprot | Q69TW5 | 4e-98 | BZP46_ORYSJ; bZIP transcription factor 46 | ||||
TrEMBL | J3MCA7 | 1e-133 | J3MCA7_ORYBR; Uncharacterized protein | ||||
STRING | OB06G16510.1 | 1e-134 | (Oryza brachyantha) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 2e-33 | abscisic acid responsive elements-binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os06g10880.3 |