PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os05g37170.6 | ||||||||
Common Name | Os05g0443900, OSNPB_050443900 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 433aa MW: 48179.2 Da PI: 6.1908 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.1 | 5.9e-11 | 122 | 151 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 k err+++NReAAr+sR+RKka++++Le+ LOC_Os05g37170.6 122 AKTERRLAQNREAARKSRLRKKAYVQQLET 151 799*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.9E-6 | 119 | 195 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.381 | 121 | 165 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.0E-8 | 122 | 152 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-6 | 123 | 166 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.2E-7 | 123 | 152 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 126 | 141 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.8E-29 | 204 | 278 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0025281 | anatomy | pollen | ||||
PO:0001015 | developmental stage | K second mitotic division stage | ||||
PO:0007130 | developmental stage | sporophyte reproductive stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MYAAAGYLAA RPPTLEIFPS WPMSHLQEPY SQNSQSVGST TDSSSAQNTM SQAELVSPAS 60 MRSDSGQEQQ QQEVLMVTID DYNYKQGLGA AIATAPSFQQ HAGGLDMRKH GSTRKDGKLL 120 DAKTERRLAQ NREAARKSRL RKKAYVQQLE TSRIRLQQIE QELQRARSQG LFPGGCSAPG 180 DMSSGAVMFD MDYTRWIDDD SKCMAELQGA LQAQLPDGNL GAIVEECMRH YDELFHLRAV 240 LASSDVFHLM TGMWAAPAER CFLWMAGFRP SEILKMLIPQ LDPLTEQQLM GMCSLQQSSE 300 QTEEALAQGL HQLHQSLADA VGGGPLNDGA DVANYTGLMA LALGRLENLE SFYRQADNLR 360 QETLHHMRRI LTTRQTARCF LSIGEYNRRL RALSSLWASR PRENFIATEN VSPTGTEFQV 420 IQQSQQNQFS GF* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.23469 | 0.0 | callus| leaf| panicle| seed |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 32994729 | 0.0 | ||||
Expression Atlas | Q0DHT1 | - |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os05g37170.6 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os05g37170 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK109520 | 0.0 | AK109520.1 Oryza sativa Japonica Group cDNA clone:002-113-G01, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015639064.2 | 0.0 | transcription factor TGAL5 isoform X8 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | A0A0E0HF71 | 0.0 | A0A0E0HF71_ORYNI; Uncharacterized protein | ||||
TrEMBL | A0A0E0PN56 | 0.0 | A0A0E0PN56_ORYRU; Uncharacterized protein | ||||
STRING | OS05T0443900-01 | 0.0 | (Oryza sativa) | ||||
STRING | OBART05G18270.2 | 0.0 | (Oryza barthii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-137 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os05g37170.6 |
Publications ? help Back to Top | |||
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