PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os02g58670.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 103aa MW: 10481.7 Da PI: 6.5205 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 22 | 3.5e-07 | 67 | 94 | 1 | 28 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaei 28 e+e ++++r++kNRe+A rsR+RK+ ++ LOC_Os02g58670.2 67 EEEERKTIRMMKNRESALRSRARKRVRT 94 678899******************9776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-7 | 65 | 95 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence Send to blast |
MAEQLGGVGS PQLSLSSCSS FLSISSAGTS AADGAPHLSL GVGGAEELDL LLQVGIGGGG 60 GGGGDEEEEE RKTIRMMKNR ESALRSRARK RVRTSNPFPH TI* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.18354 | 1e-149 | callus| leaf| panicle| stem |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os02g58670.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os02g58670 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP005290 | 1e-172 | AP005290.2 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1282_E10. | |||
GenBank | AP014958 | 1e-172 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015623884.1 | 9e-57 | protein FD | ||||
TrEMBL | A0A0D3FCJ0 | 2e-55 | A0A0D3FCJ0_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0E0GFF8 | 2e-55 | A0A0E0GFF8_ORYNI; Uncharacterized protein | ||||
TrEMBL | A0A0E0NNE1 | 2e-55 | A0A0E0NNE1_ORYRU; Uncharacterized protein | ||||
TrEMBL | A2XBE0 | 2e-55 | A2XBE0_ORYSI; Uncharacterized protein | ||||
TrEMBL | I1P5X3 | 2e-55 | I1P5X3_ORYGL; Uncharacterized protein | ||||
TrEMBL | Q6ESB3 | 2e-55 | Q6ESB3_ORYSJ; Os02g0833600 protein | ||||
STRING | ORUFI02G40230.1 | 4e-56 | (Oryza rufipogon) | ||||
STRING | OS02T0833600-01 | 4e-56 | (Oryza sativa) | ||||
STRING | ONIVA02G41380.1 | 4e-56 | (Oryza nivara) | ||||
STRING | ORGLA02G0337900.1 | 4e-56 | (Oryza glaberrima) | ||||
STRING | OBART02G38520.1 | 4e-56 | (Oryza barthii) |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os02g58670.2 |