PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os02g52780.2
Common NameLOC4330838, OJ1004_A11.20, Os02g0766700, OSNPB_020766700, P0539D10.39
Organism
Oryza sativa subsp. japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 331aa    MW: 34924.9 Da    PI: 9.1596
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os02g52780.2genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.51.9e-15277320548
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                       +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k+
  LOC_Os02g52780.2 277 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNDELQKK 320
                       79**************************************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-11273329IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887275320IPR004827Basic-leucine zipper domain
PfamPF001703.1E-13277320IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.16E-11277320No hitNo description
Gene3DG3DSA:1.20.5.1704.8E-15277320No hitNo description
CDDcd147076.41E-25277328No hitNo description
PROSITE patternPS000360280295IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009049anatomyinflorescence
PO:0001083developmental stageinflorescence development stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MDFPGGSGRQ QQLPPMTPLP LARQGSVYSL TFDEFQSTLG GVGKDFGSMN MDELLRSIWT  60
AEESHAVGAA TTTTATTASV AAAEHAAVGA PPVQRQGSLT LPRTLSQKTV DEVWRDMMCF  120
GGGGASTAPA AAEPPPPAHR QQTLGEITLE EFLVRAGVVR EDMSVPPVPP APTPTAAAVP  180
PPPPPQQQTP MLFGQSNVFP PMVPPLSLGN GLVSGAVGHG GGGAASLVSP VRPVSSNGFG  240
KMEGGDLSSL SPSPVPYVFK GGLRGRKAPG IEKVVERRQR RMIKNRESAA RSRQRKQAYM  300
MELEAEVAKL KELNDELQKK QVLSMFCLHF *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.117810.0callus| leaf| panicle| root| seed| stem
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329820850.0
Expression AtlasQ6Z312-
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Highly expressed in leaves. {ECO:0000269|PubMed:18931143}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os02g52780.2
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs02g52780
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0720620.0AK072062.1 Oryza sativa Japonica Group cDNA clone:J013109E06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015625853.10.0bZIP transcription factor 23
SwissprotQ6Z3120.0BZP23_ORYSJ; bZIP transcription factor 23
TrEMBLB9F3E80.0B9F3E8_ORYSJ; Uncharacterized protein
STRINGOS02T0766700-010.0(Oryza sativa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19290.22e-41ABRE binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Xiang Y,Tang N,Du H,Ye H,Xiong L
    Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice.
    Plant Physiol., 2008. 148(4): p. 1938-52
    [PMID:18931143]
  3. Shen J,Xie K,Xiong L
    Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses.
    Mol. Genet. Genomics, 2010. 284(6): p. 477-88
    [PMID:20941508]
  4. Luo C,Guo C,Wang W,Wang L,Chen L
    Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice.
    Plant Cell Rep., 2014. 33(2): p. 323-36
    [PMID:24247850]
  5. Sakuraba Y, et al.
    Rice ONAC106 Inhibits Leaf Senescence and Increases Salt Tolerance and Tiller Angle.
    Plant Cell Physiol., 2015. 56(12): p. 2325-39
    [PMID:26443376]
  6. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]
  7. Dey A,Samanta MK,Gayen S,Sen SK,Maiti MK
    Enhanced Gene Expression Rather than Natural Polymorphism in Coding Sequence of the OsbZIP23 Determines Drought Tolerance and Yield Improvement in Rice Genotypes.
    PLoS ONE, 2016. 11(3): p. e0150763
    [PMID:26959651]
  8. Zong W, et al.
    Feedback Regulation of ABA Signaling and Biosynthesis by a bZIP Transcription Factor Targets Drought-Resistance-Related Genes.
    Plant Physiol., 2016. 171(4): p. 2810-25
    [PMID:27325665]
  9. Dey A,Samanta MK,Gayen S,Maiti MK
    The sucrose non-fermenting 1-related kinase 2 gene SAPK9 improves drought tolerance and grain yield in rice by modulating cellular osmotic potential, stomatal closure and stress-responsive gene expression.
    BMC Plant Biol., 2016. 16(1): p. 158
    [PMID:27411911]
  10. Gui J, et al.
    OsREM4.1 Interacts with OsSERK1 to Coordinate the Interlinking between Abscisic Acid and Brassinosteroid Signaling in Rice.
    Dev. Cell, 2016. 38(2): p. 201-13
    [PMID:27424498]