PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os02g36510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | EIL | ||||||||
Protein Properties | Length: 505aa MW: 54438.3 Da PI: 4.8761 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 372.3 | 8e-114 | 81 | 368 | 2 | 289 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaa....tgakksn.......ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkp 83 +lkkrmwkdqmll++l++ + + + +ga +s+ +++ + rrk+m raQDg+L++Mlk+me+cna+GfvYg i+e g+p LOC_Os02g36510.1 81 DLKKRMWKDQMLLMKLEGGRPGGGGGRGGGglaaAGAGTSSegqleeeTPEARCRRKAMLRAQDGVLRHMLKMMEACNARGFVYGVIDEAGQP 173 9********************9998888766666555555567777779******************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS EIN3 84 vegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176 ++g+sdsLr+WWk++v+fdr+gp+a++ +++g+s + ++ h+l+++qD+tlgS+Lsal+qhc+ppqr+fple+g++pPWWPtG LOC_Os02g36510.1 174 MSGSSDSLRGWWKDNVSFDRAGPMALIGP-----AAAGDSPQ--AGGGGLHRLQDIQDSTLGSVLSALIQHCEPPQRSFPLERGLAPPWWPTG 259 ***************************99.....34555555..59*********************************************** PP --HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXX CS EIN3 177 kelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslr 268 +e wwg++g ++++qg+ppy+kphdlkkawkvs+L+avikhmsp+++++r+l++qsk+lq+kmsakes+++++v++qee++ ++++++ LOC_Os02g36510.1 260 EEPWWGTQGeTQAHQGAPPYRKPHDLKKAWKVSLLSAVIKHMSPRFDQMRKLVWQSKRLQQKMSAKESDTWSKVIRQEEALDRRLKTSL---- 348 **********************************************************************************9999986.... PP XXXXXXXXXXXXXXXXXXXXX CS EIN3 269 kqspkvtlsceqkedvegkke 289 + + + ++ ++++d++g ++ LOC_Os02g36510.1 349 -HITLLDADGGEEDDSDGLED 368 .45566677777777663333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.1E-117 | 81 | 338 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 3.9E-65 | 216 | 347 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.09E-57 | 216 | 340 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence Send to blast |
MASRSPTNKQ ISSEDRVRGA RGKRHHHSSD EWSMEHAEEH EHGRGGGERD DAAEPEAEQP 60 ELEQEELSDS ESGAESIEIS DLKKRMWKDQ MLLMKLEGGR PGGGGGRGGG GLAAAGAGTS 120 SEGQLEEETP EARCRRKAML RAQDGVLRHM LKMMEACNAR GFVYGVIDEA GQPMSGSSDS 180 LRGWWKDNVS FDRAGPMALI GPAAAGDSPQ AGGGGLHRLQ DIQDSTLGSV LSALIQHCEP 240 PQRSFPLERG LAPPWWPTGE EPWWGTQGET QAHQGAPPYR KPHDLKKAWK VSLLSAVIKH 300 MSPRFDQMRK LVWQSKRLQQ KMSAKESDTW SKVIRQEEAL DRRLKTSLHI TLLDADGGEE 360 DDSDGLEDVV RGAAAQDKRK REYTRSGSGS SSGNSGGGKF PRGGSGGADH HQLAVMLPEL 420 AAAADQEGRS PINELMKLYY SCLQQEEGAA DGGEAGGEGC DVAAAALAVP PEVLAGVDEV 480 AQDVLFDLIG SYPEVDDVLH FMDE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 5e-50 | 217 | 344 | 4 | 130 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 5e-50 | 217 | 344 | 4 | 130 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 110 | GGRGGGG |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 32993660 | 0.0 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os02g36510.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os02g36510 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP005116 | 0.0 | AP005116.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0703B01. | |||
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015625091.1 | 0.0 | putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Swissprot | Q9FJQ5 | 2e-92 | EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein | ||||
TrEMBL | A0A0E0NGS4 | 0.0 | A0A0E0NGS4_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI02G22630.1 | 0.0 | (Oryza rufipogon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 | Representative plant | OGRP563 | 16 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65100.1 | 2e-78 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os02g36510.1 |
Publications ? help Back to Top | |||
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