PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os01g11350.1 | ||||||||
Common Name | BZIP02, Os01g0211800, P0031E09.34 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 331aa MW: 35691.6 Da PI: 7.5064 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.4 | 9.8e-11 | 190 | 235 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ LOC_Os01g11350.1 190 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 235 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-14 | 186 | 250 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.76 | 188 | 244 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.6E-10 | 190 | 240 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.41E-11 | 190 | 244 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.7E-14 | 190 | 244 | No hit | No description |
CDD | cd14703 | 3.00E-25 | 191 | 241 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 193 | 208 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0025281 | anatomy | pollen | ||||
PO:0001015 | developmental stage | K second mitotic division stage | ||||
PO:0007130 | developmental stage | sporophyte reproductive stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MAQLPPKIPT MATAWPEFGG GHHHHAAHGH HHQRSPSMGA FLAAPLPPFP LPPPAPANGG 60 AQQQQQQQQH QPSWVDEFLD FSATKRGAHR RSVSDSVAFL DPVSDDNAGV GAHDFDRLDD 120 DQLMSMFSDD LQPPPPQQQP AAPAASASSP SDHNSMNDEK QDKGETDEAQ SECDGATPGQ 180 PASPATVDPK RVKRILANRQ SAQRSRVRKL QYISELERSV TSLQTEVSAL SPRVAFLDHQ 240 RSLLTLGNSH LKQRIAALAQ DKIFKDGGTE EGDREAAANL PPAKPQERGI PTGGRGPGPR 300 PRQCRPDRQR GGRRGRAMPA LVIGRDPDAL * |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.33336 | 0.0 | flower |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 32986153 | 0.0 | ||||
Expression Atlas | Q5QNI5 | - |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots and panicles. {ECO:0000269|PubMed:18065552}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os01g11350.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os01g11350 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK100944 | 0.0 | AK100944.1 Oryza sativa Japonica Group cDNA clone:J023138F18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015635844.1 | 1e-137 | basic leucine zipper 2 | ||||
Swissprot | Q5QNI5 | 0.0 | BZP02_ORYSJ; Basic leucine zipper 2 | ||||
TrEMBL | J3KXK7 | 1e-150 | J3KXK7_ORYBR; Uncharacterized protein | ||||
STRING | OS01T0211800-01 | 0.0 | (Oryza sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 | Representative plant | OGRP126 | 17 | 181 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 7e-77 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os01g11350.1 |
Publications ? help Back to Top | |||
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