PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LOC_Os01g10610.1 | ||||||||
Common Name | BZR2, LOC4327076, Os01g0203000, P0489A05.32 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | BES1 | ||||||||
Protein Properties | Length: 366aa MW: 37921.4 Da PI: 8.8819 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 211.4 | 2.4e-65 | 28 | 175 | 2 | 150 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspessl 94 +gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+e++e++g+s s sp+ss+ LOC_Os01g10610.1 28 VGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGYKPPERMEVIGCSVSPSPCSSY 120 689****************************************************************************************** PP DUF822 95 qsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsssl 150 q +sp++sy+asp+sssfps +s+ ++++ ++ + +lp+l++ls+++ss+ LOC_Os01g10610.1 121 Q--------PSPRASYNASPTSSSFPSGASSPFLPHPNNmangvdgNPILPWLKTLSNSPSSK 175 *........99*******************999999988999999999********9999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 8.2E-65 | 29 | 169 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway | ||||
GO:0040008 | Biological Process | regulation of growth | ||||
GO:0003677 | Molecular Function | DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0009030 | anatomy | carpel | ||||
PO:0007130 | developmental stage | sporophyte reproductive stage | ||||
PO:0007606 | developmental stage | gynoecium development stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MATGGGGGGG GMGGGGVGGG AGAAGVGVGG RMPTWREREN NKRRERRRRA IAAKIFAGLR 60 AHGGYKLPKH CDNNEVLKAL CNEAGWVVEP DGTTYRKGYK PPERMEVIGC SVSPSPCSSY 120 QPSPRASYNA SPTSSSFPSG ASSPFLPHPN NMANGVDGNP ILPWLKTLSN SPSSKKHPQL 180 PPLLIHGGSI SAPVTPPLSS PTARTPRMKT DWDESNVQPT WTGSNSPCVV NSTPPSPGRT 240 MLPDPAWLAG IQISSTSPSS PTFSLVSSNP FSVFKDAILV GNNSSRMCTP GQSGTCSPAI 300 PGMAPHPDIH MMDAVSDEFA FGSSTNGGHQ AAGLVRAWEG ERIHEDSGSD DLELTLGSSR 360 TRAAA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 5e-22 | 31 | 101 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 5e-22 | 31 | 101 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 5e-22 | 31 | 101 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 5e-22 | 31 | 101 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.1302 | 0.0 | callus| flower| leaf| panicle| root| seed| stem |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 32977489 | 0.0 | ||||
Expression Atlas | Q0JPT4 | - |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LOC_Os01g10610.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
RiceGE | Os01g10610 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK067471 | 0.0 | AK067471.1 Oryza sativa Japonica Group cDNA clone:J013107L10, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015622415.1 | 0.0 | protein BZR1 homolog 2 | ||||
Swissprot | Q0JPT4 | 0.0 | BZR2_ORYSJ; Protein BZR1 homolog 2 | ||||
TrEMBL | A0A0E0MST5 | 0.0 | A0A0E0MST5_ORYRU; Uncharacterized protein | ||||
STRING | OS01T0203000-01 | 0.0 | (Oryza sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 | Representative plant | OGRP1595 | 15 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 8e-83 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | LOC_Os01g10610.1 |
Entrez Gene | 4327076 |
Publications ? help Back to Top | |||
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