 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA035744-PA |
| Common Name | OsI_37091 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
GRAS |
| Protein Properties |
Length: 595aa MW: 66648.1 Da PI: 6.5122 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA035744-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 298.6 | 1.6e-91 | 216 | 585 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+ lL++cA+a+++++++ a +lL++++++a +gd+mqR+a+yf+++L+arla+s+++ly+ + +++ +e l+++kl+ ++ + k++
BGIOSGA035744-PA 216 RMLLIQCAQAMATDNQQSAGELLKKIKQHALATGDAMQRVAHYFAKGLEARLAGSGKHLYQ--NHV---RMSLVEYLKVYKLYMAACCFKKVA 303
679*********************************************************5..233...34489******************* PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
+ a +I++av+g++r+Hi+D++i Gl+Wp L++ L sR++gpp++RiT v+ p++g + +e+ g+ L++ A++++vpf+f+++va +
BGIOSGA035744-PA 304 LMFAAMTIMQAVQGKKRLHIVDYGIRCGLHWPDLFRRLGSREDGPPEVRITIVDIPQPGfrPFQHIEAAGHCLSSCANKFRVPFRFQAVVAAK 396
**********************************************************99999****************************** PP
GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
+e++ e+L+++p+E+l+Vn + l+desv + +rd L+ + +++P+v++ + ++ ++sFl rf al yysalfd+l+a+ p
BGIOSGA035744-PA 397 WETVGAEDLHIEPDEVLVVNDLWSFSALMDESVFCDGpnPRDVALRNISKMQPDVFIQGIINGSY-GASFLSRFRGALLYYSALFDMLDATTP 488
********************************98776669************************9.789************************ PP
GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
res r +E+ +lg+ + n++acega+ +er e++++W++r ++aG+++++l+ +++++++ ++k++ + + + e+ ++l++gW++r L++
BGIOSGA035744-PA 489 RESGLRLALEQNVLGPYALNAIACEGADLVERPEKYRQWQARNHRAGMQQLKLRPDIVDTIREEVNKYHHKDFLLGEDGQWLLQGWMGRVLFA 581
*********************************************************************888********************* PP
GRAS 370 vSaW 373
SaW
BGIOSGA035744-PA 582 HSAW 585
**** PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 595 aa
Download sequence Send
to blast |
MANPEDFFWE ALLKENEAPS PSPVFFELPP TPLANSDGST DPSSLLDNQL LSYVSSMLME 60
DEMGSSAAVT NLQCVNRGST EEANNMLPGS EVVRAFLKGM EEASKLLPRN NSFRMLETVD 120
QVSSHGHCRG GKKKNHDRDE QQLEEELGRS SKLAAMTNAG TEEAGARELL DELMLHSHET 180
CIKDMEKLRI DMDNEADKTI KKKGKKGSSS KVVDLRMLLI QCAQAMATDN QQSAGELLKK 240
IKQHALATGD AMQRVAHYFA KGLEARLAGS GKHLYQNHVR MSLVEYLKVY KLYMAACCFK 300
KVALMFAAMT IMQAVQGKKR LHIVDYGIRC GLHWPDLFRR LGSREDGPPE VRITIVDIPQ 360
PGFRPFQHIE AAGHCLSSCA NKFRVPFRFQ AVVAAKWETV GAEDLHIEPD EVLVVNDLWS 420
FSALMDESVF CDGPNPRDVA LRNISKMQPD VFIQGIINGS YGASFLSRFR GALLYYSALF 480
DMLDATTPRE SGLRLALEQN VLGPYALNAI ACEGADLVER PEKYRQWQAR NHRAGMQQLK 540
LRPDIVDTIR EEVNKYHHKD FLLGEDGQWL LQGWMGRVLF AHSAWVPQQQ DNSSG
|
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Os.14762 | 0.0 | callus| flower| leaf| panicle| seed| stem |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012619 | 0.0 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |
