PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

BGIOSGA035015-PA

Common Name

OsI_35556

Organism

Oryza sativa subsp. indica

Taxonomic ID

39946

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 282aa MW: 31401.9 Da PI: 10.2765

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
BGIOSGA035015-PA	genome	RIS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.7	4.4e-07	150	195	17	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 A+rsR RK+++i+eLe+kv++L++e + e+e l+++ l+ e BGIOSGA035015-PA 150 AQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLE 195 89***********************999999999888887666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-5	139	198	IPR004827	Basic-leucine zipper domain
CDD	cd14703	4.04E-14	140	190	No hit	No description
SuperFamily	SSF57959	5.13E-6	149	192	No hit	No description
Gene3D	G3DSA:1.20.5.170	8.9E-6	150	192	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
MHVAGRATTG RRVTRLRCST EGAAAGAYAN GFEGMGGGGG GGQAAPWGGV QEYYAKPSSF 60 GRHQGRPWEQ GMNNLVNYRQ SGGPPMPAKE KVGGHHGSPS VLRDHDHGMD RRSSDESGHD 120 QKVGPERKEG VPPKHAQSEA DTKRAKQQYA QRSRVRKLQY IAELERKVQA LQSEGIDVSA 180 EMEFLSQQNI MLDLENKALK QRLESLAQEQ LIKRFQQEMF EREIGRLRSL YQQQQQQQKQ 240 PQPTTTLSRS NSRDLDSQFA NLSLKHKDPN SGPLRTQSSS IL

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Os.23107	0.0	callus\| flower\| leaf\| panicle\| root\| seed\| stem

Expression -- Microarray ? help Back to Top
Source	ID	E-value
GEO	32982290	0.0

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK072267	0.0	AK072267.1 Oryza sativa Japonica Group cDNA clone:J023004I18, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015617316.1	0.0	uncharacterized protein At4g06598
TrEMBL	B8BJQ2	0.0	B8BJQ2_ORYSI; Uncharacterized protein
STRING	ORUFI11G07090.1	0.0	(Oryza rufipogon)
STRING	OS11T0218000-01	0.0	(Oryza sativa)
STRING	ONIVA11G06910.2	0.0	(Oryza nivara)
STRING	OBART11G06850.1	0.0	(Oryza barthii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3310	36	66

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	2e-47	bZIP family protein