 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
BGIOSGA032532-PA |
| Common Name | OsI_32745 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
HB-other |
| Protein Properties |
Length: 442aa MW: 48971.3 Da PI: 6.9971 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA032532-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 16.7 | 1.3e-05 | 385 | 413 | 4 | 32 |
-SS--HHHHHHHHHHHHHSSS--HHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeeree 32
++t++q+e+Le++++++++ps ++r++
BGIOSGA032532-PA 385 YVQYTPDQVEALERVYAECPKPSFSRRQQ 413
6789*********************9997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 442 aa
Download sequence Send
to blast |
MPEACNDIAG SPAEGSCNCK GNSHVVVVID GNKTTAAAPT NRRDPEVCPL ISKVHGRVRS 60
IDPGAYDPMV VSLGPCHAGR DDLLQMQREK PMCLREICSL TGRTELYFLQ QVISAHLRQQ 120
ALAYYLHGIH DMKPAAAAAG RNESDNIILL NFRFNRMLLH DAAFLLVTMK ALDNVNEAAA 180
AHGERRTHGR WTDVAIVHDL LLLENQIPFT VVEKLYYEVA AVGEDDDEHC KPFSDVMRDF 240
VRSIIEKHAN RGCSIHQNGR AVHHLLHQCH MLLEPTKSPV TGDTTGSRDD DDDDDASVDR 300
LKRRWHRAVQ YHVAGVGLTK RIFDGGVRHH RLLDVEYRGG ALEIPVLHAA KGETLVVVVV 360
AGEEDGGSGS DGGGYDKAGM DSGKYVQYTP DQVEALERVY AECPKPSFSR RQQSPTSSPS 420
RRSRSGSQNR SLQMFDKKRM KE
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012618 | 0.0 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |
