PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | BGIOSGA031176-PA | ||||||||
Common Name | OsI_32216 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 206aa MW: 22343.2 Da PI: 10.1822 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 53.3 | 6.1e-17 | 122 | 168 | 4 | 50 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++r rr++kNRe+A rsR+RK+a++ +Le++v++L++eNk+L+ + e BGIOSGA031176-PA 122 DRRKRRMIKNRESAARSRARKQARVNNLETEVEQLKQENKMLRVKYE 168 789***************************************97655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.9E-12 | 119 | 189 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.151 | 121 | 169 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.9E-15 | 121 | 169 | No hit | No description |
Pfam | PF00170 | 9.6E-15 | 122 | 169 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.74E-20 | 123 | 175 | No hit | No description |
SuperFamily | SSF57959 | 1.13E-11 | 123 | 169 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 126 | 141 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 206 aa Download sequence Send to blast |
MEDDEDMWAN TSSPSASPPR PRGFISTALS LNSTHLQGLL PSSFVDAAAS PCHASGNNNG 60 GGDGRNAAQM SSIFSASASY HQQQHHLPAP APLDGAILPA RRFGLDMCAT AAAPAGVPAA 120 GDRRKRRMIK NRESAARSRA RKQARVNNLE TEVEQLKQEN KMLRVKYEQG HSGQWLEKPS 180 LARFSQMSIF VCPRSGYVAT LERVLM |
Expression -- UniGene ? help Back to Top | ||||||
---|---|---|---|---|---|---|
UniGene ID | E-value | Expressed in | ||||
Os.83225 | 0.0 | panicle |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | CP012617 | 0.0 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015611345.1 | 2e-85 | uncharacterized protein LOC9271661 | ||||
TrEMBL | A2Z3L0 | 1e-151 | A2Z3L0_ORYSI; Uncharacterized protein | ||||
STRING | ONIVA09G19210.1 | 1e-120 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9764 | 30 | 44 |