PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA030473-PA | ||||||||
Common Name | OsI_30788 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | G2-like | ||||||||
Protein Properties | Length: 183aa MW: 20244.1 Da PI: 8.0925 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 30 | 1.1e-09 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+vkgLtl h+kSHLQkYRl BGIOSGA030473-PA 1 MGVKGLTLFHLKSHLQKYRL 20 99*****************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.7E-8 | 1 | 21 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 6.9E-22 | 61 | 106 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MGVKGLTLFH LKSHLQKYRL GKQSGKEASE QSKDASYLLD AQGGMSVSPR VSTQDVKENQ 60 EVKEALRAQM EMQRRLHEQV EVQKHVQIRM EAYQKYIDTL LEKACKIVSE QLASSGFSIS 120 DNDLPELSGG VMCGSADTLS SSIFHQLSVS PINLHSPEGK PTPSGIEGQM ILQKSPELKR 180 KSC |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.6430 | 0.0 | callus| flower| leaf| panicle| seed| stem| vegetative meristem |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 32979360 | 0.0 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK069336 | 0.0 | AK069336.1 Oryza sativa Japonica Group cDNA clone:J023010K22, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015611986.1 | 1e-131 | protein PHR1-LIKE 2 | ||||
Swissprot | Q94A57 | 3e-39 | PHL2_ARATH; Protein PHR1-LIKE 2 | ||||
TrEMBL | A2YZK6 | 1e-131 | A2YZK6_ORYSI; Uncharacterized protein | ||||
TrEMBL | I1QMR9 | 1e-130 | I1QMR9_ORYGL; Uncharacterized protein | ||||
STRING | ORGLA09G0034800.1 | 1e-131 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3427 | 38 | 73 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 1e-41 | G2-like family protein |
Publications ? help Back to Top | |||
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