PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA029105-PA
Common NameOsI_30119
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 435aa    MW: 46337.7 Da    PI: 6.747
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA029105-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-10322379562
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                       kr +r   NR +A rs +RK  +i+eLe kv++L++e ++L  +l +l+  +  l ++
  BGIOSGA029105-PA 322 KRVKRILANRQSAARSKERKMRYIQELEHKVQVLQTEATTLSAQLTMLQRDSTGLATQ 379
                       899******************************************9999877666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-18318382IPR004827Basic-leucine zipper domain
PfamPF077162.9E-9319371IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.829320383IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.9E-11322379No hitNo description
SuperFamilySSF579598.13E-12322373No hitNo description
CDDcd147031.26E-23323374No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MDDPGAADPG ARPHHVSPGQ PPVVPRSPTP LDLSSAAAAA AAASYRRLSP SLRPPAHPQA  60
RLPSPYPQIP SSSSSAAAGS SGHHARSLSQ PLFFSLDSLP PLPYADLAAP PAIPPSPPSS  120
SSDPPPPGLP PRKGGHRRSQ SDIPFGFSHL SPPLPPPAPV KREAATAAEG CRSDGDDFAL  180
YDLVNSYMDL DGMEALNSSE ERHEDRDSRA SGTRAGSVAD SSENEAESHS TPVERKDGGG  240
KSRHCRSLSV DSFIEKLNFD ESPKLPLPSP SGGLSRSGSG SLDGGAASLF GAEFANGEFT  300
EAEKKKIMAN ERLAEIALTD PKRVKRILAN RQSAARSKER KMRYIQELEH KVQVLQTEAT  360
TLSAQLTMLQ RDSTGLATQN NELKIRLQAM EQQAQLRDGN ACYQPSSALV LIFPYNNEVK  420
GYNLIGELAA FDLKL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.159270.0callus| leaf| panicle| root| seed| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126160.0CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015651132.10.0transcription factor VIP1
TrEMBLA2YXP70.0A2YXP7_ORYSI; Uncharacterized protein
STRINGONIVA08G25390.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-72bZIP family protein