PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA026419-PA
Common NameOsI_27386
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 273aa    MW: 29170.8 Da    PI: 9.4295
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA026419-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.8e-15182224547
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                       +r++r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN++L++
  BGIOSGA026419-PA 182 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENQRLRE 224
                       79***************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-15175224No hitNo description
SMARTSM003381.0E-14178247IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335180224IPR004827Basic-leucine zipper domain
PfamPF001703.2E-12182224IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-11182225No hitNo description
CDDcd147073.38E-22182223No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MSCHGGGGGG GGGGEGALSR QGSVYSLTLN EVESHLGEPL RSMNLDDLLR TVLPAAAAAA  60
ETAGRKTVDE VWRDIQGAST GRHHATPMGE MTLEDFLSRA GVAVDGAASA AGAHWLRGHY  120
PPPPPPTTTT TLQYVGGSGA VVDGVYNRVD GHGVAGFLSQ VGVAGRKRGG GVDGVVEKTV  180
ERRQKRMIKN RESAARSRAR KQAYTNELEN KISRLEEENQ RLREHKAVAD FSTFPSCVDF  240
LKAFLTQKLE PVMQIVPQPE PKQQLRRTTS ASF
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1154741640.0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1109150.0AK110915.1 Oryza sativa Japonica Group cDNA clone:002-173-C06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645810.11e-173ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA2YQ270.0A2YQ27_ORYSI; Uncharacterized protein
STRINGONIVA07G26520.11e-174(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-44bZIP family protein