PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA026235-PA
Common NameOsI_026099, PRMT3
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 620aa    MW: 68143.8 Da    PI: 4.2219
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA026235-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.00077111129220
                       EETTTTEEESSHHHHHHHH CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHi 20 
                       kC  Cg++Fs++s+L  H+
  BGIOSGA026235-PA 111 KCWSCGQVFSSNSELCGHL 129
                       7***************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.03E-3333171No hitNo description
PfamPF127562.8E-657130IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002805778IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.40.50.1502.5E-38253413IPR029063S-adenosyl-L-methionine-dependent methyltransferase
PROSITE profilePS5167875.702253582IPR025799Protein arginine N-methyltransferase
SuperFamilySSF533351.46E-62259567IPR029063S-adenosyl-L-methionine-dependent methyltransferase
CDDcd024402.50E-11294413No hitNo description
PfamPF136493.2E-11295410No hitNo description
Gene3DG3DSA:2.70.160.118.9E-41417601No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006479Biological Processprotein methylation
GO:0005829Cellular Componentcytosol
GO:0008168Molecular Functionmethyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    Send to blast
MATREHELRP EQERLGEDRE EYEDGEEEEE EEEEEEGWDD WESDGDDAGG GGGGLLCLFC  60
SARFDSESSL FSHCASEHRF DFYRVVKETG MDFYGCIKLI NFVRSKVAEN KCWSCGQVFS  120
SNSELCGHLH ALEIPQLEGK VPWGDDVYLK PFLEDDSLLH SLSVFDDDDE DDCGMPMEKG  180
GCSAGNGSLA ETCESNLKSI INDGSDVIDR FERTCTIEST DGECSGSLAQ EPSDKQLKIA  240
RASAAARGIN SVDESYFGSY SSFGIHREML GDKVRTEAYR DALLGNPSLM NGATVLDVGC  300
GTGILSLFAA KAGASRVIAV DGSAKMVSVA TEVTKSNGFL YDENMEMQQK RDTQVITVVH  360
TKAEELNHKI QVPSNKFDVL VSEWMGYCLL YESMLSSVLY ARDHFLKPGG AILPDTATIF  420
GAGFGKGGTS LPFWENVYGF DMSCIGKEVT GNSARFPVVD ILASEDIVTE TAVLNSFDLA  480
TMKENEMDFT SSFELRLSES GVSPSGVTWC YGIILWFDTG FTNRFCKEKP VNLSTSPFST  540
PTHWSQTIFT FEEPIAMAKE ESAVVSSASV GTDECPAVMI RSRISIVRAS EHRSIDISIE  600
TTGISSDGRK RSWPVQIFNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6nt2_A1e-652155579325Protein arginine N-methyltransferase 1
6nt2_B1e-652155579325Protein arginine N-methyltransferase 1
6nt2_C1e-652155579325Protein arginine N-methyltransferase 1
6nt2_D1e-652155579325Protein arginine N-methyltransferase 1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329906980.0
Functional Description ? help Back to Top
Source Description
UniProtMethylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1054890.0AK105489.1 Oryza sativa Japonica Group cDNA clone:001-127-B11, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015647334.10.0probable protein arginine N-methyltransferase 3
SwissprotA2YP560.0ANM3_ORYSI; Probable protein arginine N-methyltransferase 3
TrEMBLA0A0D3GU310.0A0A0D3GU31_9ORYZ; Uncharacterized protein
STRINGOBART07G23750.10.0(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP789599