PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA025074-PA
Common NameOsI_24738
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 198aa    MW: 20538.9 Da    PI: 10.9053
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA025074-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.13.7e-1379129151
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                       e++++r rrk++NRe+ArrsR+R+++++eeLe+ ++eL ae++aL+++l+ 
  BGIOSGA025074-PA  79 EERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDA 129
                       68899*******************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.7E-1078130No hitNo description
PfamPF001701.9E-879129IPR004827Basic-leucine zipper domain
SMARTSM003382.1E-779143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.01381144IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-883134No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MLSLHDAMPL DFGLPDMDVG FGLFGVDAAA FGYDGVASDA AAGLSPVVGA GDGSGGGGDV  60
LLYCDGGGGG GGGGEDGEEE RRRRLRRKIS NRESARRSRA RRRQRVEELE RAADELRAER  120
RALASRLDAT ARRALAVRGA NARHHAEAGV LRRRLGEAQR NAAVLIGLSR LLRSTANGAH  180
GGAAPAQLSN GGVASLMT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0037020.0AP003702.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1007_H09.
GenBankAP0053090.0AP005309.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0474G09.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8B6V51e-130B8B6V5_ORYSI; Uncharacterized protein
TrEMBLQ7XIZ31e-130Q7XIZ3_ORYSJ; Os07g0124300 protein
STRINGOS07T0124300-001e-131(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1683199