PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA020889-PA | ||||||||
Common Name | OsI_23699 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 159aa MW: 17884.3 Da PI: 10.1602 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.5 | 5.8e-13 | 96 | 124 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le+ BGIOSGA020889-PA 96 KTLRRLAQNREAARKSRLRKKAYIQQLET 124 7789***********************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.3E-10 | 90 | 137 | No hit | No description |
SMART | SM00338 | 1.0E-5 | 92 | 152 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.565 | 94 | 123 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.2E-10 | 96 | 124 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.44E-8 | 96 | 127 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 99 | 114 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
MCKCRRRNPE GYDMPSDLDQ ALLLYFDGQE QDKPSTQEEP HKPLNFVKET LNIFPSQPMD 60 GEPTPTPKKE GGSGSGGAMA ASASSELKGP KTPDPKTLRR LAQNREAARK SRLRKKAYIQ 120 QLETGRIRLA HLEQEIQFTR AQGAFSRCWN SKPRLTLSN |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.50121 | 1e-140 | stem |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK119909 | 1e-138 | AK119909.1 Oryza sativa Japonica Group cDNA clone:002-183-A10, full insert sequence. | |||
GenBank | CT833105 | 1e-138 | CT833105.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA207O13, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015643999.1 | 8e-76 | transcription factor TGAL8 isoform X1 | ||||
Swissprot | Q69T21 | 2e-76 | TGAL8_ORYSJ; Transcription factor TGAL8 | ||||
TrEMBL | B8B4L7 | 1e-114 | B8B4L7_ORYSI; Uncharacterized protein | ||||
STRING | OBART06G21000.2 | 2e-75 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12972 | 21 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.2 | 5e-35 | bZIP family protein |
Publications ? help Back to Top | |||
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