PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA020389-PA
Common NameOsI_21038
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 380aa    MW: 40364.5 Da    PI: 9.6898
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA020389-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.83.6e-21245307163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+elkre+rkq+NRe+ArrsR+RK+ae+e L++ v++L aeN++L++e+++l++ ++kl+ e+
  BGIOSGA020389-PA 245 ERELKREKRKQSNRESARRSRLRKQAETEDLATQVESLAAENTSLRSEISRLSESSEKLRLEN 307
                       89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.6E-31193IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.0E-16242304No hitNo description
PfamPF001709.4E-20245307IPR004827Basic-leucine zipper domain
SMARTSM003385.9E-21245309IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.15247310IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11248303No hitNo description
CDDcd147022.95E-22250298No hitNo description
PROSITE patternPS000360252267IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MAHDEAVATQ KIGKTTSPPK DQPTPCPFPD WSAVQAYYGP GVLPPTYFAP AIASGHAPPP  60
YMWGPQPIMP PPFGTPYAAM YPHGGAYPHP LMPMMANPLS MEPAKSASSK EKGSNKKLKE  120
VDGAAVSTGS GDSKKTMTSS GDYSAEGSSD VNDLKVGKTG RKRRLDDGAG AETSAAAKME  180
NALPPSHILG STAVLPNHSF PAQVIRPSAT NVANSRALGT PISPPPGVIV PSHTGVSTEL  240
LIKDERELKR EKRKQSNRES ARRSRLRKQA ETEDLATQVE SLAAENTSLR SEISRLSESS  300
EKLRLENSAL MGKLKDPAAS TQAETSLQKT TTASSPRVVE NFLSMIDNTN KTSVRHTEHA  360
EPKLRQLLGS GPATDVVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1261267RRSRLRK
2261268RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.195530.0callus| flower| leaf| panicle| root| seed| stem
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329754580.0
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0654400.0AK065440.1 Oryza sativa Japonica Group cDNA clone:J013020K21, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015640745.10.0common plant regulatory factor 1
TrEMBLA0A0E0HIN80.0A0A0E0HIN8_ORYNI; Uncharacterized protein
TrEMBLA2Y7M10.0A2Y7M1_ORYSI; Uncharacterized protein
STRINGONIVA05G28290.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.19e-44G-box binding factor 3