PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA015977-PA | ||||||||
Common Name | OsI_15027 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 426aa MW: 46468.7 Da PI: 6.8493 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 22.4 | 2.6e-07 | 292 | 333 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +r +r NR +A++s ++K + + eL++k ++L++e ++L BGIOSGA015977-PA 292 RRVKRILNNRASATKSKEKKMKHVGELQRKLQVLQSETTTLG 333 5789999******************************99985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-12 | 288 | 352 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 3.1E-5 | 289 | 338 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.979 | 290 | 353 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.04E-9 | 292 | 348 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-7 | 292 | 349 | No hit | No description |
CDD | cd14703 | 7.52E-19 | 293 | 344 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence Send to blast |
MEGEPSRRLS LLDRCDDGSE DPVVPPRVPT ILNLASHHRL DRSKFLPLIH PAPARFISST 60 GSSFPPYSEP PPSAPMLEVG SGFGLEDLYS FFPNHFFSME SISLPPCDVV DVPPVIPLAL 120 RSGRSNQGLP SKLPLIEGHR RSHSDIPFGY SQEHPQMPPV ASVKPEVTTI EGHQLEDVAA 180 AALKDMGIQA WSPSGSIDKE VKSSGAGSTT HHCRSLSVDS FMMGNLNFGV VGQQMSSPPL 240 LTTEVNVGGG EPIGSTASPF AAELANVKFT EDEKKKIVMD KSLSKIVLTD PRRVKRILNN 300 RASATKSKEK KMKHVGELQR KLQVLQSETT TLGAQVTVMQ RNNNELVSQN NELKTRLQAM 360 DQLAQLGDAL TSRLAAEAQH LRAVVSEISD PNLPSGPHQQ LSSDMDQLQQ LLTQRQTSQI 420 QQNQPQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012612 | 0.0 | CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence. | |||
GenBank | CR855053 | 0.0 | CR855053.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101K10, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015635275.1 | 0.0 | uncharacterized protein LOC107275813 | ||||
TrEMBL | A2XQW1 | 0.0 | A2XQW1_ORYSI; Uncharacterized protein | ||||
STRING | ONIVA08G02020.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14793 | 11 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21230.1 | 2e-42 | bZIP family protein |