PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA014751-PA
Common NameOsI_16581
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 392aa    MW: 43637.9 Da    PI: 8.1485
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA014751-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.62e-09631794126
               NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                       G  F+Pt e++v++yL  + + +   l + ++++d+y ++P  L     +a+e+ ew+fF++r++  + g  ++ra   g  + + + k   +
  BGIOSGA014751-PA  63 GQPFDPTAEDIVNRYLPLRRALRCDALPRQVHDADVYGAHPALLAsVYPAANERfEWFFFVCRRQC-PGG--RRRA-GPGDYRLSQEAK---H 148
                       667************977766666556567**************83333344457******99775.433..2333.445555444322...2 PP

               NAM  95 kkgelvglkktLvfykgrapkg..ektdWvmhey 126
                          +     +++ +y+ ++  g  ++t+W m ey
  BGIOSGA014751-PA 149 ---RGNAFCHSFRYYEYEDAGGgfRETEWRMVEY 179
                       ...2235667888886655544235899999988 PP
2NAM24.95.6e-0823435713128
               NAM  13 elvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eek.ewyfFskrdkkyatgk......rknratksgyWkatgkdkevlskkg 97 
                        lv+ yL+    g++l + +v +  d+++++P  + +++ a +++ ew+f + r + +a+g+      r+++ +  g      + + v   ++
  BGIOSGA014751-PA 234 VLVQLYLASLRLGNPLAC-RVHRADDVFDAHPAVITAALPAaNDRcEWFFAAVRPRGHAQGHgdgappRPRK-AGPGAYVPVRECRVVDG-RR 323
                       58999****999999998.666667*********98533331444699999999999998777777645544.57799998888776666.88 PP

               NAM  98 elvglkktLvfy...kgrapkgektdWvmheyrl 128
                        ++g++ ++ +    ++ ++ +++t+W m+eyr+
  BGIOSGA014751-PA 324 GDMGCRLVFWYReddEEARRASRRTEWWMDEYRF 357
                       89***9999888554344555679********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-2353202IPR003441NAC domain
PROSITE profilePS5100516.03260204IPR003441NAC domain
PfamPF023653.6E-764179IPR003441NAC domain
PROSITE profilePS5100513.457222386IPR003441NAC domain
SuperFamilySSF1019416.67E-22233384IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MRPRASQAAA PETAAAAESL REEETEDGWV FLAGRSRATR PPPPPPSPMA RAVASGSSGG  60
GGGQPFDPTA EDIVNRYLPL RRALRCDALP RQVHDADVYG AHPALLASVY PAANERFEWF  120
FFVCRRQCPG GRRRAGPGDY RLSQEAKHRG NAFCHSFRYY EYEDAGGGFR ETEWRMVEYG  180
DRGRDAGAGG SEGFELVVCK VYPARGGALH ERLGADRAVL ATRHRADEDA KPQVLVQLYL  240
ASLRLGNPLA CRVHRADDVF DAHPAVITAA LPAANDRCEW FFAAVRPRGH AQGHGDGAPP  300
RPRKAGPGAY VPVRECRVVD GRRGDMGCRL VFWYREDDEE ARRASRRTEW WMDEYRFGPD  360
FPYGELPAPM ARGEDEELVV YKVYPRLVGN RR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.986550.0panicle
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAL6629690.0AL662969.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence.
GenBankAP0149600.0AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence.
GenBankCR8552130.0CR855213.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101P20, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015634867.10.0uncharacterized protein LOC9267434
TrEMBLB8ARN60.0B8ARN6_ORYSI; Uncharacterized protein
STRINGORUFI04G19680.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP147671819