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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
BGIOSGA014504-PA |
Common Name | OsI_17092 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family |
GRAS |
Protein Properties |
Length: 619aa MW: 64918.2 Da PI: 7.5717 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
BGIOSGA014504-PA | genome | RIS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 283.6 | 5.5e-87 | 262 | 619 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
++lL e+A a+++g++e a + L+ l+ a+++gd qRl+a+++ AL++r+ + + ++ + e+ a +l++++sP+++++
BGIOSGA014504-PA 262 RQLLSEAAAAIADGHNETAATHLTALKRAANSRGDVEQRLVAMMVAALSSRIGQ-------TASVPDI---CGGETRAGSQLLHDISPCFRLA 344
689**************************************************9.......1111122...24455566789*********** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
+aN aI++av ++++H +Dfd+s + Q + L++ La+R+ + sl++T+v +p+s ++++ +t L+k+Ae+ g++ +f++ v+ r
BGIOSGA014504-PA 345 LHAANVAIVDAVGDHRAIHLVDFDVSAP-QHADLIRCLAARRLPGTSLKVTAVTDPASPFTQSVTAT-LHLQKLAERAGIDYRFKM-VSCRAG 434
*************************987.99************************987666666555.57***************9.7999** PP
GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
++e ++L ++ gEalaVnl+++l +++desvs +++rde+L+ v+ l P+vv +veqe++ n++++ +rf++a+ +y a+++sl+a++pres
BGIOSGA014504-PA 435 EIEASKLGCEAGEALAVNLAFALSHVPDESVSPANPRDEILRRVRALGPQVVALVEQELNSNTAPLTTRFTDACAHYGAILESLDATIPRESA 527
********************************************************************************************* PP
GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
er+ E++ lg ++ n+va ega+r er+e ++kWr+r+++aGF+pv+l+ +a+q+ + v+ g+ v+ e+g l lgW++r ++++SaW
BGIOSGA014504-PA 528 ERARAEAA-LGGRAANAVAREGADRLERCEVFGKWRSRFGMAGFRPVALGPGIADQVLARQGPVA-AGFAVKAENGVLRLGWMGRVVTVASAW 618
*******9.9999*******************************************977777777.99************************* PP
GRAS 374 r 374
r
BGIOSGA014504-PA 619 R 619
8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 619 aa
Download sequence Send
to blast |
MEPGAPWRDP RQGYLYGVGS AVQMPMQQRS DAAAAGGVLK RSLGDMERWQ QHQHQQRQIA 60 MQQQLYLRTV RQRTAAASAA VSPLTSADIA AVLGGPPSQP LVLSGSSMGG AFGSPSSTLS 120 SITTASRAVA MPLMQPQLQR QQQVTYMASS PQVQAFGTAR ALPPAPATSD LSILQELEKQ 180 LLGDDDEVEA AMSGTGSAVT GSEWEEQLNS ITAAPSPPLT AATTPNNNNN AVGMTRSPSN 240 SSTSTASSSA SCSPPTSATT SRQLLSEAAA AIADGHNETA ATHLTALKRA ANSRGDVEQR 300 LVAMMVAALS SRIGQTASVP DICGGETRAG SQLLHDISPC FRLALHAANV AIVDAVGDHR 360 AIHLVDFDVS APQHADLIRC LAARRLPGTS LKVTAVTDPA SPFTQSVTAT LHLQKLAERA 420 GIDYRFKMVS CRAGEIEASK LGCEAGEALA VNLAFALSHV PDESVSPANP RDEILRRVRA 480 LGPQVVALVE QELNSNTAPL TTRFTDACAH YGAILESLDA TIPRESAERA RAEAALGGRA 540 ANAVAREGAD RLERCEVFGK WRSRFGMAGF RPVALGPGIA DQVLARQGPV AAGFAVKAEN 600 GVLRLGWMGR VVTVASAWR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT831209 | 0.0 | CT831209.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA055J15, full insert sequence. |