PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA013793-PA
Common NameOsI_14008
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 308aa    MW: 32861.8 Da    PI: 5.3106
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA013793-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.92.2e-23200262163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+elkrerrkq+NRe+ArrsR+RK++e+eeL +kv eL+a N++L+ el++lkk ++ +++e+
  BGIOSGA013793-PA 200 ERELKRERRKQSNRESARRSRLRKQQECEELSQKVTELTAVNSTLRTELDKLKKDCEDMEAEN 262
                       89*********************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-17193260No hitNo description
PfamPF001703.4E-21200262IPR004827Basic-leucine zipper domain
SMARTSM003384.5E-21200264IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.093202265IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-10203258No hitNo description
CDDcd147021.49E-17205255No hitNo description
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MASSAASPSS SKSDDERRQD GDRDTRDPAA SSAAAAAAAQ THAEWAASMQ AYYAAAAAAA  60
GGHPYAWPPP QSVPPMAGCA VPSAAAEGKS KRKTSGGPSG EDSSGSGDGG SEDSSERRDD  120
ADEKGLSPAK WRKLGHPDIE GETSQAAAMS EQNPVKAVPN LNIGMDIWSN STMAAMPSGQ  180
VEVNAGTHLR RDKALSQMDE RELKRERRKQ SNRESARRSR LRKQQECEEL SQKVTELTAV  240
NSTLRTELDK LKKDCEDMEA ENSQLMDEMV QSEGSSVIAT LSIKIDTSKD RHGSSSQLNK  300
HTNDDSKG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216222RRSRLRK
2216223RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.541631e-137callus| flower| panicle
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329874591e-137
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1022501e-134AK102250.1 Oryza sativa Japonica Group cDNA clone:J033088G19, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025879816.10.0DNA-binding protein EMBP-1 isoform X5
SwissprotP250322e-48EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLB8ALU50.0B8ALU5_ORYSI; Uncharacterized protein
STRINGONIVA03G39930.11e-176(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.15e-30G-box binding factor 1